DPCstruct | MC8404
Metacluster Properties and Pfam Annotations
| Number of structural domains | 51 |
|---|---|
| Mean domain length (aa) | 121 ± 8 aa |
| Standard deviation of domain lengths | 8.36 |
| Length coefficient of variation | 0.07 |
| Mean AlphaFold2 pLDDT confidence score | 83.62 |
| Mean fraction of residues predicted as intrinsically disordered | 0.31 |
| Mean length-normalized TM-Score | 0.50 |
| Mean intra-cluster local Distance Difference Test score | 0.85 |
| Mean intra-cluster sequence similarity (%) | 39.72 |
| Pfam Score | 90.97 |
| Assigned Pfam label(s) | CL0684- CL0303 |
Seed Sequences
Each DPCstruct metacluster stores at most two representative sequences: the cluster center and the member with the highest pLDDT confidence score. When both point to the same domain, only one entry is shown.
| Protein ID | Range | Seed Sequence |
|---|---|---|
| A0A3Q3JY82 | 5-120 | None |
| A0A2A2LIJ4 | 420-540 | None |
| A0A835V1B1 | 66-183 | None |
| A0A453JYD4 | 81-200 | None |
| A0A3M7QFM1 | 110-232 | None |
| D8J396 | 399-540 | None |
| A0A520UU49 | 209-341 | None |
| F2US85 | 279-407 | None |
| A0A016V9N3 | 418-539 | None |
| A0A023GBR7 | 38-147 | None |
3D Structure Viewer
A maximum of two representative PDB files is stored per metacluster: the cluster center or the highest-pLDDT member. You can switch from them when possible.
AlphaFold Confidence (pLDDT)
Very high (pLDDT > 90)
High (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
pLDDT is a per-residue measure of local confidence.