DPCstruct | MC5840
Metacluster Properties and Pfam Annotations
| Number of structural domains | 252 |
|---|---|
| Mean domain length (aa) | 138 ± 22 aa |
| Standard deviation of domain lengths | 22.12 |
| Length coefficient of variation | 0.16 |
| Mean AlphaFold2 pLDDT confidence score | 78.19 |
| Mean fraction of residues predicted as intrinsically disordered | 0.25 |
| Mean length-normalized TM-Score | 0.67 |
| Mean intra-cluster local Distance Difference Test score | 0.64 |
| Mean intra-cluster sequence similarity (%) | 27.29 |
| Pfam Score | 96.41 |
| Assigned Pfam label(s) | CL0644- PF00057- CL0124 |
Seed Sequences
Each DPCstruct metacluster stores at most two representative sequences: the cluster center and the member with the highest pLDDT confidence score. When both point to the same domain, only one entry is shown.
| Protein ID | Range | Seed Sequence |
|---|---|---|
| A0A0D8YCD1 | 3-126 | None |
| A0A2K5CUE0 | 402-541 | None |
| A0A821RR17 | 18-210 | None |
| G3UNR5 | 44-188 | None |
| A0A193PMI3 | 29-162 | None |
| G3NLK4 | 5-129 | None |
| A0A7J6AVK8 | 384-505 | None |
| F4X7C8 | 85-224 | None |
| A0A183KS68 | 111-247 | None |
| A0A4Z2BNY6 | 146-299 | None |
3D Structure Viewer
A maximum of two representative PDB files is stored per metacluster: the cluster center or the highest-pLDDT member. You can switch from them when possible.
AlphaFold Confidence (pLDDT)
Very high (pLDDT > 90)
High (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
pLDDT is a per-residue measure of local confidence.