DPCstruct | MC3940
Metacluster Properties and Pfam Annotations
| Number of structural domains | 270 |
|---|---|
| Mean domain length (aa) | 167 ± 24 aa |
| Standard deviation of domain lengths | 24.46 |
| Length coefficient of variation | 0.15 |
| Mean AlphaFold2 pLDDT confidence score | 81.28 |
| Mean fraction of residues predicted as intrinsically disordered | 0.19 |
| Mean length-normalized TM-Score | 0.53 |
| Mean intra-cluster local Distance Difference Test score | 0.57 |
| Mean intra-cluster sequence similarity (%) | 20.62 |
| Pfam Score | 80.53 |
| Assigned Pfam label(s) | CL0023- PF08719- CL0194 |
Seed Sequences
Each DPCstruct metacluster stores at most two representative sequences: the cluster center and the member with the highest pLDDT confidence score. When both point to the same domain, only one entry is shown.
| Protein ID | Range | Seed Sequence |
|---|---|---|
| A0A316LI79 | 65-226 | None |
| A0A2Z6RG84 | 54-256 | None |
| O62074 | 1333-1509 | None |
| A0A816V767 | 83-279 | None |
| A0A6V7PYP7 | 182-361 | None |
| A0A6L5CSA9 | 2-138 | None |
| A0A2P8XDW7 | 102-282 | None |
| A0A5J4W108 | 99-230 | None |
| A0A5J4W1L8 | 860-1033 | None |
| A0A5J4W527 | 241-414 | None |
3D Structure Viewer
A maximum of two representative PDB files is stored per metacluster: the cluster center or the highest-pLDDT member. You can switch from them when possible.
AlphaFold Confidence (pLDDT)
Very high (pLDDT > 90)
High (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
pLDDT is a per-residue measure of local confidence.