DPCstruct | MC3940
Metacluster Properties and Pfam Annotations
| Number of structural domains | 270 |
|---|---|
| Mean domain length (aa) | 167 ± 24 aa |
| Standard deviation of domain lengths | 24.46 |
| Length coefficient of variation | 0.15 |
| Mean AlphaFold2 pLDDT confidence score | 81.28 |
| Mean fraction of residues predicted as intrinsically disordered | 0.19 |
| Mean length-normalized TM-Score | 0.53 |
| Mean intra-cluster local Distance Difference Test score | 0.57 |
| Mean intra-cluster sequence similarity (%) | 20.62 |
| Pfam Score | 80.53 |
| Assigned Pfam label(s) | CL0023- PF08719- CL0194 |
Seed Sequences
Each DPCstruct metacluster stores at most two representative sequences: the cluster center and the member with the highest pLDDT confidence score. When both point to the same domain, only one entry is shown.
| Protein ID | Range | Seed Sequence |
|---|---|---|
| A0A6J8E4D6 | 189-340 | None |
| A0A7J7JKZ8 | 6-189 | None |
| A0A7J7JK11 | 9-123 | None |
| A0A6G0Y405 | 21-167 | None |
| A0A6G0Y608 | 49-234 | None |
| A0A6G0YCB5 | 2-192 | None |
| A0A2P6MMX2 | 134-312 | None |
| A0A2P6MVD8 | 379-557 | None |
| A0A2P6MYN3 | 98-263 | None |
| A0A2N1MZH4 | 144-366 | None |
3D Structure Viewer
A maximum of two representative PDB files is stored per metacluster: the cluster center or the highest-pLDDT member. You can switch from them when possible.
AlphaFold Confidence (pLDDT)
Very high (pLDDT > 90)
High (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
pLDDT is a per-residue measure of local confidence.