DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| UPI0006876836 | 263-1262 | 1000 | VYGVYEGLSSAEINTVTQTGDGYIWAGAYSGLYRYNGTNFEQMDLDPRISNAIVLRTDKKGRLWIGTNDSGVACYDTYRDTIRFF... |
| R6XF84 | 21-817 | 797 | ASAQKHKFIHYGMENGMSSNTIFKILQDKDGLMWFGTNDGLTRFDGTTLKTWRNTPSDSRSLGNNSIYSLKEDRNGTLYIGTENG... |
| F7NSJ6 | 35-825 | 791 | SVYSRLANPQIYSVANDHQGFLWFGTTDGLKRYDGYQFVSFQHEPDQPGSLSNNNVGVMLHDSQSRLWVGTWGGGLNLYQPQSQT... |
| F2IKA8 | 12-722 | 711 | LLVVSLKLHAQLHTFREYNHRDGLKITSTLSTTQDELGYLLIGTDGDGIVRFNGTSFESIHPPKGLDRPYHVTGILQINNEVYFS... |
| A0A0Q0G3L8 | 14-836 | 823 | AMPSTASITDYVVKQWNIKDGLPSQSLKSVVQDNQGYMWLGTQFGLSRFDGNTFTNYNTQNSLFLPSNGINKLLIDGEGLLWVGT... |
| K1HKC7 | 33-838 | 806 | LIANDIRALLLDSRGVLWIGSRAGLSVRQQGQIAIDEESLQHRFTNITAIVEDKDQGIWIGSYGQGILYKGRKQTLLFKEQSGLF... |
| A0A1H4EID4 | 36-1036 | 1001 | DGLSGNRITALCDDMYGRIWIGTSQGLDIYDSRHLRKIEEFAGLEICSLYDAGERIFIGSALFVGVYDYAGGCFSRLTWEGEDVG... |
| A0A1N6DBV7 | 15-926 | 912 | GIFKASSQQYTFRHYQVEDGLSHNTVWCAYQDSKGFMWFGTKDGLNRFDGTSFKIFRNNAEDSTSIGNNFIRCLFEDNKKRLWIG... |
| W6TSN6 | 14-921 | 908 | NFTSLKTKDGLSSNMVNAILKDRYGLMWFATEDGLNKFDGTNFTVYKYKSDDPSGIQANDVRALHEDKSGDLWIGTSGGSLSLYD... |
| A0A1C5UGY1 | 40-1044 | 1005 | YADYSYSQIYLPSDVPSVVHCIFKDKYGFIWMGTRAGLFRYDGQNIKDYNKDKNSPLGSYIYKIFQDNNGHLWVLTNKGICIYDY... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model