DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| UPI0009DF5B41 | 34-1038 | 1005 | LPNSLVNCIAEDKDGMVWIATEDGLSRYNGSSFVTYKQIPGNPNSIQDNFVRCVCVDKRGHVFVGTTVGVQMFRPLTNDFTPLLI... |
| B5JLI1 | 45-1028 | 984 | ESVDMNESEPSGEVKRIVQDSLGFVWYATREGVHRFDGYAVRTYSKVPGASNSIISSTVLELFLDAEDNLWVGTDRGVSRYDLGL... |
| UPI0009EBF326 | 74-859 | 786 | PDPPAASLSLERYGLDEGLSQLSVTALQADDQGFLWVATQDGLNRFDGHGFRTYRAEGLSRARRPSLASGSIDSLAFEAQRQRLW... |
| A0A1F2TZQ9 | 23-794 | 772 | AAQYRVDAFTTSNGLPQNTVSAIAQTPDGYLWFATYDGLARYDGVRFTVFDKGNTPAIRHNQFLTLLADRTGTLWGGTVEGGLVR... |
| UPI0009BD298F | 135-885 | 751 | GLQQSGVSSIYQDAEGFIWIAAPSGLYRFDGHHLLAFLDAARRRHGSSAAAITGIAGAGDGRLWLSMGALTDSTRPGLLLFDPGH... |
| R5NWP2 | 44-990 | 947 | GYMQSVYNQKSGIGSNEVNCLFQSSSGYIWAGTDGGLYRSNGSGFQSIDLWDTDRTDLYSINCIMQDQDGRMWIGTDNYGLFYIE... |
| A0A1Q4FVQ6 | 12-663 | 652 | RNSLANNIVWSIFKDRSENIWLGTDLGFSLWSNRKVEKILPIYQLTASSDGNRFYKINRDRNGWYWLGGDNGLIRVRGLDDKNTE... |
| A0A1F3MQM5 | 41-1024 | 984 | DTQENRVQGLVQDKTGFLWFATQGGLLRYDGQNFVTYRYDGNNPNSLSNDYIESLFLDSKGRLWMTHWQQGALTTFEPERGIFTR... |
| K6XIH6 | 32-1071 | 1040 | NNVNGMIRDSQGFIWLVNNSGLLRFDGNEFKLFPGLEQFTPAKVDDVVEGQDGRIWIATYDKGLALFDTNSAKLSFFDLAAKFDI... |
| A1ZH19 | 28-849 | 822 | LKAGIPQSEVYTLVNGPKGGIWLGTNGGGVARFNGHKFEVFNKRTHGFVHDQVNQLFFDSKDRLWIGTTTGISRFDGKLTKSFPL... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model