DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| UPI0004729B58 | 43-997 | 955 | NGKIFDTVVSIASDSLGFLWYATPSGLYRYDSHQFRKFDKSDGLYSNYVKRLFTDSKGDLWVGTYNGLNRFDTSLSKFEKYIYDD... |
| A0A1M5HTK7 | 27-852 | 826 | KTLTTKDGLSNNSVNDIISDVKGRLWIATWDGLNRYDGKDFKVFKHINNDSTSLAGNVIYSLQRDGTKTIWCLTDNNTVSRFVNQ... |
| A0A1V3QAW6 | 35-868 | 834 | APVFTNFSPRDGLPDTVTVAIRTDRDGFVWAASPAGVFRYDGRHWVGSDDPAMAHWVDSLWVDRQGTLWAAFRSDGLARYDGTRW... |
| A0A081C4K4 | 46-859 | 814 | HDFARSTVYSIIQDQAGFLWFGSNDGLQRFDGQMLLSYRHDPHNPQSLSDNTVLALYEDRAGVLWIGTEQGGLNRFDRARGTFTR... |
| R6LF11 | 62-1128 | 1067 | IWMSSLNGLNRYDGNSFRTFLPKNNGRISLADRRVKHLYEDNNGFLWISTSADRFSCYDLKKDCFVDFTGCGEHEDHYGYITILS... |
| A0A0P9GGI7 | 24-815 | 792 | YSRYLKNYSVEEGLSQSYVNQTLQDNYGYLWVATDYGLNRFDGYEFEKITGPDNVFVNDGIIALHLLENGNLIVSTYYTGAYFVD... |
| UPI0002EB1F58 | 49-1005 | 957 | QDQYGFVWIATTNGLWRYDGGSFKNYLKNELDPTSITDNHISCLFEDTKGDLWIGTYGGGLLKYIRECDCFERFVHNDDNPKSLS... |
| UPI00094F7EB4 | 32-1088 | 1057 | KPLKPSQQYSFMDGLSHNGVTCILEDSRAYLWIGTYDGLNRYDGYEFKHYKNTVDQHILSNNRIRSIYEDSDGNIWIGTEDGLSI... |
| UPI0003A9F4EC | 27-904 | 878 | QTMINSLGENDLPAPESIAFVSKSTDGFYYLGNTTGLSVFDGKVAEQLTIRDHKSPYVHDQTVQSKMYEDGNELLWFSTYTALHA... |
| A0A1Q6X942 | 52-905 | 854 | TSWTAKDGVPGPVRAIAQTPDGYLWLGTEAGLYRFDGLHFVAWEPSFGEQTLGSSVWSLCTSRDGSLWIGFSSGGISQLRSGHLK... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model