DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| A0A0B2JKM1 | 19-1030 | 1012 | GLGYDGVKSIIQDRNGFIWIVTADELFHFDGFNYKRYSKRMAVRNEFSSSVYFQSVFSDSKRRLYLATSQGVFLYNEDSDMFERV... |
| A0A0E9LY28 | 98-1131 | 1034 | EDRQGFIWFETHDGHYHYFDPISETFRSLSYLFSDVEEGHAVFSEFLQYSKDEIWIGLSNKGVLRLLYNSRDHSYQETYFTSRGI... |
| A0A1V5VTI8 | 22-838 | 817 | AQTIQNAKPHFSYFSISDGLSQNNVSCIFQDTKGFLWIGTHAGLNKYNGKQFENFVNDPEDSLSISDNTIFGISEDIEQNIWIAT... |
| J9GC24 | 47-1062 | 1016 | GLGSRRVLGIEKGHKGFLWFLTHEGIDRYNGQEYVHYPLTAHGKTLNAFPNLNTLHTDSTGIIWEIGKSGQLFRYNTRQDRFDLV... |
| UPI000237C8CD | 53-933 | 881 | LHSSNGFLWIGTFEGINVFDGYKMESFQADPMDDTSLSNNFVECMLEDSYGNIWVGTQNGLNLFVPEKQEFIKYYPDSHDSTSIC... |
| UPI000378E456 | 24-962 | 939 | FLISVCSLMLRAQEQIRFDHLTVEEGLSSRSVLSVAQDALGFLWAGTMDGLNRYDGKNIRIYRSFYESNPMNPNIKITSLVSGSK... |
| A0A1W9SR49 | 32-836 | 805 | YSPKKYNGHSQIWCITEDKRGVMYFGTTESIIEYDGVKWRKIFSSNASIIRDIDIDTSGRIFVSCYKDFGYLAPNSNGKMEYISL... |
| A0A1M6CLD2 | 4-886 | 883 | LIFILFLLPFCFYAQQTTPYFKNYSKSDYQGENANWDITQNADGIIYTANNYKLLEYNGNEWKKYALPKNLVIRSAEVIHDTLYT... |
| A0A1V5KS64 | 12-558 | 547 | VTPDSCFALGTMGNGLVIIDKNGKLLHQFTQTSGFFSNTVSCLLLDQQRNLWVGTDGGIAVLEYDSPLSEFTIPGGTGPSDFCRY... |
| A0A1C5WSQ3 | 19-1014 | 996 | GLSCSQIESLMQDSKGYIWISTSYGLSRFDGVQFDTFYHDDNDSLSLAGNKVVSVIEDNQGKIWVATTTNLQWYDSGNFDFRKIK... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model