DPCstruct | MC5500
Metacluster Properties and Pfam Annotations
| Number of structural domains | 307 |
|---|---|
| Mean domain length (aa) | 166 ± 20 aa |
| Standard deviation of domain lengths | 20.26 |
| Length coefficient of variation | 0.12 |
| Mean AlphaFold2 pLDDT confidence score | 89.97 |
| Mean fraction of residues predicted as intrinsically disordered | 0.22 |
| Mean length-normalized TM-Score | 0.64 |
| Mean intra-cluster local Distance Difference Test score | 0.59 |
| Mean intra-cluster sequence similarity (%) | 17.64 |
| Pfam Score | 100.00 |
| Assigned Pfam label(s) | CL0016 |
Seed Sequences
Each DPCstruct metacluster stores at most two representative sequences: the cluster center and the member with the highest pLDDT confidence score. When both point to the same domain, only one entry is shown.
| Protein ID | Range | Seed Sequence |
|---|---|---|
| A0A1Y3NCD9 | 4-129 | None |
| A0A1Y2AE07 | 59-208 | None |
| A0A1Y1YM98 | 567-727 | None |
| A0A0A8B415 | 47-190 | None |
| A0A2V5MY92 | 368-542 | None |
| A0A2V5MUH7 | 177-373 | None |
| A0A2V5MP23 | 41-213 | None |
| A0A7Z9R813 | 40-194 | None |
| A0A1Y2FUG2 | 41-209 | None |
| A0A1Y2FRG8 | 32-194 | None |
3D Structure Viewer
A maximum of two representative PDB files is stored per metacluster: the cluster center or the highest-pLDDT member. You can switch from them when possible.
AlphaFold Confidence (pLDDT)
Very high (pLDDT > 90)
High (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
pLDDT is a per-residue measure of local confidence.