DPCstruct | MC4940
Metacluster Properties and Pfam Annotations
| Number of structural domains | 40 |
|---|---|
| Mean domain length (aa) | 390 ± 84 aa |
| Standard deviation of domain lengths | 83.87 |
| Length coefficient of variation | 0.21 |
| Mean AlphaFold2 pLDDT confidence score | 86.71 |
| Mean fraction of residues predicted as intrinsically disordered | 0.26 |
| Mean length-normalized TM-Score | 0.54 |
| Mean intra-cluster local Distance Difference Test score | 0.45 |
| Mean intra-cluster sequence similarity (%) | 14.82 |
| Pfam Score | 100.00 |
| Assigned Pfam label(s) | PF09481 |
Seed Sequences
Each DPCstruct metacluster stores at most two representative sequences: the cluster center and the member with the highest pLDDT confidence score. When both point to the same domain, only one entry is shown.
| Protein ID | Range | Seed Sequence |
|---|---|---|
| B5GY59 | 2-508 | None |
| A0A377C329 | 11-270 | None |
| A0A6H0ULQ6 | 1-235 | None |
| A0A7R8WSJ3 | 757-1228 | None |
| A0A417DD78 | 3-578 | None |
| A0A0A0V1A5 | 6-412 | None |
| A0A6G7VRI9 | 26-380 | None |
| A0A538U3L9 | 3-422 | None |
| A0A7X6M8N0 | 11-295 | None |
| A0A2X1SE90 | 45-526 | None |
3D Structure Viewer
A maximum of two representative PDB files is stored per metacluster: the cluster center or the highest-pLDDT member. You can switch from them when possible.
AlphaFold Confidence (pLDDT)
Very high (pLDDT > 90)
High (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
pLDDT is a per-residue measure of local confidence.