DPCstruct | MC46188

Metacluster Properties and Pfam Annotations

Number of structural domains289
Mean domain length (aa)282 ± 72 aa
Standard deviation of domain lengths71.61
Length coefficient of variation0.25
Mean AlphaFold2 pLDDT confidence score80.66
Mean fraction of residues predicted as intrinsically disordered0.27
Mean length-normalized TM-Score0.34
Mean intra-cluster local Distance Difference Test score0.42
Mean intra-cluster sequence similarity (%)12.90
Pfam Score88.10
Assigned Pfam label(s) CL0164- PF04385- PF01016

Seed Sequences

Each DPCstruct metacluster stores at most two representative sequences: the cluster center and the member with the highest pLDDT confidence score. When both point to the same domain, only one entry is shown.

Protein ID Range Seed Sequence
L1LDM9 3-244 None
L1LDL3 9-350 None
L1LDF8 5-358 None
L1LDS0 110-413 None
L1LBA9 14-331 None
L1LAF3 69-304 None
L1LB25 4-319 None
L1LA71 1-218 None
L1LA42 7-365 None
L1LA55 56-260 None

3D Structure Viewer

A maximum of two representative PDB files is stored per metacluster: the cluster center or the highest-pLDDT member. You can switch from them when possible.

AlphaFold Confidence (pLDDT)
Very high (pLDDT > 90)
High (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
pLDDT is a per-residue measure of local confidence.