DPCfam | MC489805
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5539 |
|---|---|
| Mean domain length (aa) | 282 ± 49 aa |
| Residues in low-complexity regions (%) | 3.96 |
| Residues in coiled-coil regions (%) | 0.0 |
| Predicted disordered residues (%) | 20.27 |
| Average transmembrane regions | 0.09 |
| Dominant Pfam architecture(s) | PF00781 |
| Sequences matching dominant architecture (%) | 81.39 |
| Average overlap percent | 35.41 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| UPI000B383447 | 32-285 | 254 | VVMRFIGGGTEPADATADARSFDRVVVSGGDGTISNVLDCLRDTHVPTLVFPSGTANLFFNNIGNGTEIAALAAACRAGRTAKVD... |
| A0A1J8R760 | 13-381 | 369 | VCGDSTAEAFFNEHVFPRLEEAHLQVVQKNATGAAGHAGTIVSEFIEKYEGDVTVILGSGDGTLHEIINALSLESPKGVREKVAS... |
| A0A1S8CU06 | 30-292 | 263 | FEVDLYLLTEANQLSEVVRQARAKHEREGGVIVAAGGDGTLNTVAQELKHSHIRMGIIPLGTFNYVARALGIPLEPFAAAEVIVK... |
| A0A1R2ATP6 | 110-380 | 271 | KNWISKILDYSGCYHKLYELNERNYFENFDLQELGEYTDIICVGGDGTMQELLTKIYVSHFDLGKWNFGIIPTGSQNALSCELNG... |
| A0A0P6IVW4 | 286-599 | 314 | PLIVIGNGKSGSNEACHLLSSARKVLNAVQAIDLSDQEPKIALQLCALLKETQCRLLIAGGDGTIAWVLNAVQNLDVKHLPETAV... |
| K8FC91 | 215-586 | 372 | NKRGRFLVFINPAAGRGKAEEVFKKHVEPVLKCARNCVVEAIVTTRSGETEERTYERSKESLLLTRGRGYESNTTTHNEDARVLG... |
| D8S4Y3 | 162-587 | 426 | CHRWVKCLHNLLSKDHKRPKDLLVLINPYGGKGIASSKWAMVSPLFSRAGIKTKVVTTERAGHAYEMMYNATDDELKCHDGIVMV... |
| A0A066YSM3 | 78-338 | 261 | LIMNPKSGGGKVEKFGLAERARELGAEVVLLDPSAPQDVAELAERAVADGADLLGVAGGDGTQAEVAQVAARHGLPFLVVSAGTR... |
| J9VZT0 | 18-298 | 281 | KVWPDIQKQLAAAHADYQTLYTAYPNHAVELAEQALSEIDTANQTDAVLIAAGGDGTLHETLLGCQHYYRVHQNDHPVPIAFLPV... |
| A0A172T8N7 | 32-297 | 266 | SREWPRLEGELQARRFDFQLISAGSGADALARVQALPPDVAVLAVGGDGTVGALLPALIGSGARPLAIVPLGSGNDYAGMLGLKP... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model