DPCfam | MC489805
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5539 |
|---|---|
| Mean domain length (aa) | 282 ± 49 aa |
| Residues in low-complexity regions (%) | 3.96 |
| Residues in coiled-coil regions (%) | 0.0 |
| Predicted disordered residues (%) | 20.27 |
| Average transmembrane regions | 0.09 |
| Dominant Pfam architecture(s) | PF00781 |
| Sequences matching dominant architecture (%) | 81.39 |
| Average overlap percent | 35.41 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| Q4N515 | 12-333 | 322 | SGGRNASHFIKQGVKSLELTKPEPLTLHICSIFEGESGNKPGFIQLRDFLSYEEPQELVFVITAGGDGTLTWVVSEVEKHSINPD... |
| E3DML3 | 19-287 | 269 | FNSYLDKFLKHFQAAGFKVDIYRSMEAGDFKYGLKNLDSSYEALIVAGGDGSASEMVDLMQKRKIDLPLGIIPAGTANDFASFLG... |
| A0A1I8GWA4 | 210-597 | 388 | PKRRDADRWVRYTERVLDSMKRRVRSAAMYVCTKAGKGAALGLMKDRVLPLLKKFDVKVTRVERPKPDELAACLMDCPTEELEDS... |
| A0A024E8N3 | 11-321 | 311 | IGVVLNPLSGHVRRNLKKLRRLVLQIPQSTVIEASNPAEIAQALDIFNLGVNDLLVVIGGDGSLQAALTASLRRSMELAPFVLAL... |
| UPI000A06D638 | 34-307 | 274 | EMIYKRFMNAHPELQSNSSVYYTTKSDEAILLTKQIVSEHRGKIKVLIIIGGDGTFYEVINGLTSEDEILLAFVPAGSGNDFARG... |
| G3QMD2 | 95-416 | 322 | WLQTLREMLEKLTSRPKQLLVFINPFGGKGQGKRIYERKVAPLFTLASITTDIIVTEHANQAKETLYEMNIDKYDGIVCVGGDGM... |
| A0A1E1J1H8 | 60-331 | 272 | AEALVLCGGDGTVNRALNLIASMSFTGTGPSREVSPRSLLEAVPLLLVPTGLHNSIATSLGVTSAERAVSSLVVGRTARVPLWAV... |
| Q03603 | 419-765 | 347 | VSPSNDCRPLLVLVNPKSGGKQGVKILQKFEYLLNPRQVYDLSKTGPEPGLQLFSTLKNCNILVCGGDGTIGWVLESMDKMTFPH... |
| A0A1I3I5I5 | 62-374 | 313 | ISELPQCVESISYKIFSTEYAGHAKDLTKSVVSQLIASDAPDCENLIVTAGGDGTSLEVQTTLFKEAMQGPKHHDAITNHITILR... |
| V4BZD7 | 96-435 | 340 | IGQKIQEYIDNNNRRPKQLLVFINPNSGKRRAVKVYYRKVKPIFDMCGIQSNAIVTKKPGEAKEILQKYDLSLVNGIITVGGDGL... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
Download
Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
Download
Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model