DPCfam | MC489805
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5539 |
|---|---|
| Mean domain length (aa) | 282 ± 49 aa |
| Residues in low-complexity regions (%) | 3.96 |
| Residues in coiled-coil regions (%) | 0.0 |
| Predicted disordered residues (%) | 20.27 |
| Average transmembrane regions | 0.09 |
| Dominant Pfam architecture(s) | PF00781 |
| Sequences matching dominant architecture (%) | 81.39 |
| Average overlap percent | 35.41 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| UPI0004AEFE53 | 238-523 | 286 | VLVNPKSGKAGGQMAQAIREALPAAEVHELSRDDDVGRLVSDALRSGSRAVGVSGGDGTVGSVAAAARAHGSPLVVFPGGTLNHF... |
| B7FWE2 | 59-445 | 387 | TNVSDGTTAIILNTNARSVTKDLEPLAASIFGTSHVFCTTTEVEAKQAADHIVQNLQSYKLVVPVGGDGTLASMINYLCDSIGGD... |
| A0A1V5NWP9 | 21-281 | 261 | KPEAAKLKGFFREHADVEVAVTSKAGDATNFTGQAIAAGFESVVAVGGDGTVNEVASALNGTKVKMGILPFGSGNGLARHHHIPF... |
| M5EDL0 | 111-507 | 397 | ALFKAAYPRTTPHRRVLVLCNPQSGQGHGKSMLDIVVKPVLRCAGCAMTVIETNEPAHAYRECQTLTLSDYDVLACVGGDGTLHE... |
| D0LIS7 | 2-341 | 340 | QIGVITNPKSRKNRGRPERADRLQSILGSFGEVHETDSVDSIKPILRDFLRKRARYWVADGGDGALHWMLRMGMEVLDEEEFIGT... |
| A0A1W9RNJ7 | 103-361 | 259 | AKKKREEIEKASRILHAPVYGFETNSREEFIDLAKKVSADCDVLVVGGGDGTFSDVINAIDLPSNKIAFLPLGSGNALRNALGLE... |
| A0A0R3U9P0 | 215-560 | 346 | GGNQGVRLIKKFQGLLNPRQVFVLSDYGPKLGSTEGNSLFEVNLLTNQNLANFNFHIPTPSLELFGRLPNARILVCGGDGTVGWI... |
| A0A0F4PPA1 | 31-268 | 238 | TSGDFARDLKRLKARSNGLTRVVVLGGDGTLHLVVNAFAYTAVEVALIPCGSGNDFARQWRVSQAHWLASALRAPAQRIDLGRIN... |
| H2MAX6 | 17-226 | 210 | PCRTMILVNPHSGRGQALQLFTGHVQGMLTEASVPYTLVITEHQNHARELVKKADLSQWDALVIMSGDGLLYEVINGLMEREDWQ... |
| A0A0S8B4B1 | 22-288 | 267 | TLNSVCGAGGVDWAVSVTRRSGDAVRFAQEALAEGFDVVAAFGGDGTVMEVASALMGGDVPVAVLPGGTANVMSTELGIPGDLTQ... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model