DPCfam | MC489805
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5539 |
|---|---|
| Mean domain length (aa) | 282 ± 49 aa |
| Residues in low-complexity regions (%) | 3.96 |
| Residues in coiled-coil regions (%) | 0.0 |
| Predicted disordered residues (%) | 20.27 |
| Average transmembrane regions | 0.09 |
| Dominant Pfam architecture(s) | PF00781 |
| Sequences matching dominant architecture (%) | 81.39 |
| Average overlap percent | 35.41 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| A0A0U0NRE2 | 4-201 | 198 | RARIIYNPTSGKELFKRMLPDVLIKLEKAGYETSAYATEREGDATLEAERALKQQYDILIVAGGDGTLNEVVNGIAEQPNRPKLG... |
| A0A1V5P550 | 3-197 | 195 | VPLDTKQACRHFLEAPENIWDVGVANGRHFLIMSGIGLDARVVYEMEPKLKKAMGSLGFILKGAQVLFWENERKSTKAKIRFLDK... |
| U3JDY4 | 17-324 | 308 | LVLLNPQSGSGRALDDFQAVVQPMLAEADIATTVFVTERPHHAHEKVRDEDLSQWDTLVVMSGDGLLFEVVNGLMERPDWKEAMK... |
| A0A0K6G1I1 | 1-383 | 383 | MLIISNPASGHKNGPQFIENYVLPLLNKYHVPFKLETTNAPKHAGELAKDYLESLGNAKSAVVLVSGGDGTIHEIINALYAKPGS... |
| F0XJE5 | 179-559 | 381 | ATWAELLLSRARRMVTTTHSGQATELCAALDIDRYDMVVPCSGDGLAHEVYNGLGRRPDARRALAQLAVAHVPCGSGNAMACNLY... |
| G4L8B6 | 18-286 | 269 | KRNLADILAVLEKAGYEASAFATTSIPYSATNEARRAGQAGFDLIVAAGGDGTINEVVNGIAPLERRPKMAIIPGGTTNDYARAL... |
| A0A1M4T5T8 | 32-285 | 254 | QNYKIYVTETTDKLENVVKELKISLTKRDLVIVIGGDGSLNHLVSLFERYHLNNYIGYIPSGSGNDFARSHNMPINTEKAIAHIF... |
| W4XQZ5 | 64-368 | 305 | VKATVFLNPAARKGKAKKLFQKNAAPLLHLAGLDVEIIQTSMEGEAKDLAGSLAKTDIVIIAGGDGTVAEVITGLLRREDEQAVS... |
| A0A0L6CYR1 | 9-309 | 301 | ISNPTSGNNRKWQARIEARLASYDHVRHHVTRSPQEAEALVPELAAMQPDVVVINGGDGTIAAALGMILDHWVPDRLPLIIVLPG... |
| UPI00054D3869 | 16-251 | 236 | NKLKAIIDTLKRQYSVDVFFTKKPKEGTAIANDIAGLYKIIAIYGGDGIINEVINADLKDSAVAVLPAGTTNVLAIELFGSPSIK... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model