DPCfam | MC489805
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5539 |
|---|---|
| Mean domain length (aa) | 282 ± 49 aa |
| Residues in low-complexity regions (%) | 3.96 |
| Residues in coiled-coil regions (%) | 0.0 |
| Predicted disordered residues (%) | 20.27 |
| Average transmembrane regions | 0.09 |
| Dominant Pfam architecture(s) | PF00781 |
| Sequences matching dominant architecture (%) | 81.39 |
| Average overlap percent | 35.41 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| UPI000783890A | 9-285 | 277 | NPSSGHEAAIDYKEDIVSVIKEKGYEVVVKETEKKDDATVFAEEAVNDGYDYVIGVGGDGTINEVIAGLARYDQQPLFSFVPFGT... |
| H0YTD5 | 577-890 | 314 | LVFVNPKSGGLKGRDLLYSFRKLLNPHQVFELTNGGPLPGFHTFSKVPSFRVLVCGGDGTVGWVLGALEEIRHKLVCSEPSVAIL... |
| A0A1G3AR36 | 30-303 | 274 | RLVQLLNTHDFQVEIFTDLAEVSAEANRLHARGQLRALVGIGGDGTAAELANRTDEGVPITLLAAGTANLFSRHFGLSGKPEKLC... |
| A0A0V0R658 | 43-458 | 416 | LKLKEEIEAKQKKCRAVVCGGDGTVMWVVEEMIKYKLDVEHCPIGIVPFGTGNDFARVLGWGGSAPGQVIGSNLGGLKKMIKKWI... |
| A0A1B3WNS2 | 30-286 | 257 | SAGIDHVMISPMKSGETIELVEAAVRDGTERVICTGGDGTVNEVVNGVVRAEKNGAARAAIGILPNGRGNDFGYAVGIPQDLQRS... |
| UPI0006D1918F | 14-294 | 281 | SNNGRTRKKWQKIAAALQSRGYDFQYIFTSAPLDAVDITRMALREGCELVIAVGGDGTINEVVNGFYLQGELINPNACLSAVPMG... |
| A0A1F5S4J2 | 26-252 | 227 | LADLGLSGRIDRLSLFKDARDFVREGVKKGVKTIVIVGNDFTLSQVIGAADEVDITFGVIPVGSKNEIARILGIEDEMSACDCLS... |
| A0A1V4M9J1 | 17-309 | 293 | GSVEKEWPRIQDLAKQRLGVFQSFLTTGPGHAVTLTRHALEHGADVMICVGGDGTLNEVVNGFMGENGPLRAGAALGFIPRGTGC... |
| D8LHV0 | 149-394 | 246 | PLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAITWKVKRPPLAIL... |
| X1WIU5 | 577-892 | 316 | NVKPVIIFINPKSGGNQGVKLLQKFQWHLNPRQVFDLSRGGPRMGLELYKKVPNLRVLACGGDGTVGWVLSILDQIANAVSFPVG... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model