DPCfam | MC489805
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5539 |
|---|---|
| Mean domain length (aa) | 282 ± 49 aa |
| Residues in low-complexity regions (%) | 3.96 |
| Residues in coiled-coil regions (%) | 0.0 |
| Predicted disordered residues (%) | 20.27 |
| Average transmembrane regions | 0.09 |
| Dominant Pfam architecture(s) | PF00781 |
| Sequences matching dominant architecture (%) | 81.39 |
| Average overlap percent | 35.41 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| T2M296 | 253-584 | 332 | SPLPNSQPLVVFVNPKSGGRQGAKLLNKFRYLLNPRQVFNLADAGPFPGLKFFSQIPNFRILCCGGDGTAGWILSTLDRLSSLKE... |
| A0A095ZF26 | 25-283 | 259 | EIRKYVNPNLDVEIVKTEYKNHTTELAREFGLKNPGSVIVACGGDGTLREVAKGVYGTDSYFAFLPCGTGNDFNRSVSVETDTIK... |
| A0A0S7BGC2 | 32-296 | 265 | ASPIEIVDVIHEMQAWKLVPEAYLVEPGWDLEKGVQDAVARGIRIFVVCGGDGTISAVARTLAGTRATLGIIPIGTQNNTALSLG... |
| UPI000A0619EE | 266-499 | 234 | DQAAALAAEAGGALGICGGDGSVNLAATVAARESLALAVFPGGTLNHFAVDLGTHSIGSTAQAVRTGSACAVDLGQVTTGTGQRL... |
| K6V8W0 | 89-343 | 255 | ALPLFYETSKEDTGTGQTREALAREVDLVCALGGDGTVRAVAAGLIGSDTPLGVLPGGTGNLLARNLALPLDNLSAALRVALTGE... |
| UPI000255E564 | 1-195 | 195 | MGGDGSIHRFLQVVQDQGLLGRIGTVGVVPLGTGNDLVRGAGIPLDPQEAARVAVAGATTERGLMVDDTGSVVVNVVHAGVAAEA... |
| UPI000690C800 | 245-515 | 271 | TFVELREGHDLKSDILTALADDSRLTMLGVWGGDGTAGTVADVAADKDLPLMVMPGGTFNHYARDVAVESPDSALEAARLGRVVR... |
| UPI0009F32AF9 | 16-301 | 286 | RARSHIKKIVQRLRDNHLTVIDATADSYESTHRAAHALARQGVSALVTVGGDGMVHLGVDSVAGTNVPLGIIPLGTGNDVSRHFA... |
| U2RM43 | 1-244 | 244 | TVRAVAEALRDRSATLGLLPSGTGNLLARNIGVPYANVEEACAIAFDGETRAIDLGVATATREDGERTEHAFLVMAGVGIDATMI... |
| Q9FFN7 | 347-666 | 320 | INAKSGGQLGPFLHRRLNMLLNPVQVFELGSCQGPDAGLDLCSKVKYFRVLVCGGDGTVAWVLDAIEKRNFESPPPVAILPLGTG... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model