DPCfam | MC489805
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5539 |
|---|---|
| Mean domain length (aa) | 282 ± 49 aa |
| Residues in low-complexity regions (%) | 3.96 |
| Residues in coiled-coil regions (%) | 0.0 |
| Predicted disordered residues (%) | 20.27 |
| Average transmembrane regions | 0.09 |
| Dominant Pfam architecture(s) | PF00781 |
| Sequences matching dominant architecture (%) | 81.39 |
| Average overlap percent | 35.41 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| P52824 | 590-909 | 320 | LVFVNPKSGGLKGRDLLCSFRKLLNPHQVFDLTNGGPLPGLHLFSQVPCFRVLVCGGDGTVGWVLGALEETRYRLACPEPSVAIL... |
| V9GCU0 | 5-184 | 180 | RDLMLGHTHELDIGKVNDRVFTNFFGIGLITDTSENINSELKGTLGRLSYFISTLQTVRTTEPFRYGVELDGHTRTGDAVMIYIS... |
| A0A1V6HBQ5 | 21-278 | 258 | LERRLHDLGIRLPTVWTEAPAHATELAAAAVRDGYEVVVAAGGDGTICEVLEGLQQAGGGTLAILPLGTGNDAARAVGVPRRFEA... |
| A0A154KQ68 | 44-307 | 264 | LEIFSWLPGNITLIETQHPGHAREIAFRIPSTTRLFVAGGDGTINEVLNGLVDARIIGRNIPPLGIIPMGTANVLAIEIGMDFRT... |
| A4BMW7 | 15-316 | 302 | RRVGVLCNPNSGRNRRCLRQVREEARRLPGAAYREAVCPAETALGIQELLASGAELLAINGGDGTLQAVLTYLLGPGERQGKPPP... |
| A0A0L0QSV5 | 41-287 | 247 | VQTESIEEVKKVCIRYAAKVDLLLILGGDGTVHACINAISPLKKRPIVGILPGGTCNDFSRVLNIPQQLEKAAAAIVEGHVVDID... |
| A0A180FB15 | 22-288 | 267 | RKIPKMIEEAFPKKAYDLDILFTEYAGHAGELAVCALDREADRILAVGGDGTINEVAKSMMHSEAVLGIIPQGSGNGLARELHIP... |
| Q5P8D2 | 42-318 | 277 | AGAAIEKVLEASGRDVELLVAKRPRELAALVRAAADRRPGILAAAGGDGTLNAVASVAYQRSLPFAVIPLGTFNYFARELGIPLD... |
| UPI000B35C7F6 | 18-257 | 240 | SRLVARIRTAAAQTGALCLIRECRRPGDIASVICRDAARGGAMRFYVCGSDADLCAAARVASGFSNAEIGIIPDARGCDFAHSYP... |
| A0A0D6GHI3 | 45-313 | 269 | DIIRRVLDEAGRRFQLMPVDDPSRLVATAREAVALAREAGGIVVAAGGDGTLNAVAGQVLGQGVPFGILPQGTFNYFGRRYGISQ... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model