DPCfam | MC489805
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5539 |
|---|---|
| Mean domain length (aa) | 282 ± 49 aa |
| Residues in low-complexity regions (%) | 3.96 |
| Residues in coiled-coil regions (%) | 0.0 |
| Predicted disordered residues (%) | 20.27 |
| Average transmembrane regions | 0.09 |
| Dominant Pfam architecture(s) | PF00781 |
| Sequences matching dominant architecture (%) | 81.39 |
| Average overlap percent | 35.41 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| U4KJN3 | 4-272 | 269 | LLIYNPVSGKGNSAKRLDHIKKYFENEKWTLDIHASKSAEDIIEVSYNHANIYELYLVLGGDGTISNVVNGMMKSDIRPKLLVLP... |
| A0A0L0HVM0 | 143-500 | 358 | LVRFRKLLVIVNPRGLPSGAGVYNDIVGKMLELAEVDIELWVTERPNHAYDFIQQESNISQYTTIITVGGDRIVHEVINALLSRP... |
| UPI0009E4B09B | 64-328 | 265 | RRLTLFFNPAAGSGSAETLLKKNAEPILHIAGLDVTIVKTEYEGQIKTLTQYIDPTTDGIVVAGGDGTLLEVVTGLLRRSDQEEI... |
| UPI0006D8E685 | 16-366 | 351 | ERQNHARELVKDVDLSQWDALVIMSGDGLLHEVINGLLERPDWEEAIRTPLGILPGGSANALAASVHYYSGVSQVRGEELLVSCG... |
| X0QKB9 | 27-298 | 272 | IAYLTAKGSAFHLEKTQYPKHATLLAQKIKPLKDAYQHIVLVIGGDGTLHQVIKGLLENKYTPSPIPIGYIPSGTGNDFSRGVNL... |
| A0A0F7N364 | 27-262 | 236 | ALRGAGAQVEAEYSRGFGHAAELAERAAGAGRTVLAVGGDGMAGTVAGALAESDAVCGLVPGAVGRNAVARALGLPRAAEELAEL... |
| A0A1M8AAB2 | 3-388 | 386 | VCVVYNPAAGKGLAEVLIREYIQPQLNIWKIQKEDRPEPIYHVTNPIRGAKDAVRYLSPLTQTSTLILLGGDGTTHEIIEEATEQ... |
| A0A1S1NTM1 | 31-286 | 256 | IELRVTQSGDDVVQFIGMAVEQGIRRIAIGGGDGTLHEAVNALMRHPVEKRPEMGIIPMGTANDFATSTGIPLSPMDALSLATDG... |
| F2I835 | 23-292 | 270 | QAYLDDHQQGYRVHITAYPGHIFDLAPKLLGNFQKDSRLLVIGGDGTLHELVAVFQAMQVDVPLTYLPAGSGNDFSRYFQQDKSH... |
| A0A1Q9AAH5 | 18-292 | 275 | PQIAEALARVFPGYALVETERGRTAAQARAAVTDATDLVLAVGGDGTVGQVVEGVLTSSFPQTPFTFLPGGTGSDFSRNFRWPDS... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model