DPCfam | MC489805
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5539 |
|---|---|
| Mean domain length (aa) | 282 ± 49 aa |
| Residues in low-complexity regions (%) | 3.96 |
| Residues in coiled-coil regions (%) | 0.0 |
| Predicted disordered residues (%) | 20.27 |
| Average transmembrane regions | 0.09 |
| Dominant Pfam architecture(s) | PF00781 |
| Sequences matching dominant architecture (%) | 81.39 |
| Average overlap percent | 35.41 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| UPI00082D42DC | 178-365 | 188 | DLLGVAGGDGTQALVAGAYAAIVRSPAYRDGKVRTSLQLLPELLTHHQGPRLSVRAGNVLIEAPQALLVSNNPYQGGDPSGFGRR... |
| A0A1V6JM63 | 20-286 | 267 | SKGKIPSIIKKNIDTGRFDPAIVYSQGPGDATRIAAENLAKGIHKIVAVGGDGTVNEVAKALINTQATFGIIPLGSGNGLGRHLR... |
| I2GSZ5 | 14-280 | 267 | EAASTALELRSLIESNGFECQYASTKDSGWETIGPEVDFLIVAGGDGTVRQVAQRQLTAPKRPEPLPIAILPKGTANNIALTLGL... |
| UPI0003B54A9B | 40-269 | 230 | LQSAGATIAGSSNFPLEPAPEAADLAGIDTLVVMGGDGTLGAASAAAKGWDGQFLAIPGGTMNLLSKALHGDASLEAIVAVAGQG... |
| A0A0F3GIG2 | 16-285 | 270 | FKASKIETARAMLQAAGYDVDLYWTQQNGDAQNRAKEVADKTADKAYSIVFACGGDGTVNEVANGLAFSSVPMAILPIGGSNVLS... |
| I4CAP6 | 40-302 | 263 | RHPDVSLRVFVPENAADISKHVDSAIEQGTDIVVAAGGDGTVNAVIQKIVGRDIVLGVLPLGTLNHFARDLGMPLDLDEAVDVIC... |
| R5NPK4 | 9-280 | 272 | NPKAGRTAIRNDLFEIIMVFSQAGYEVVTYPTQGPEDAERKVRVDGEDYDLIVCAGGDGTLDNTVCGYSKMGHKKVPLGYIPVGT... |
| A0A1R1I6Q5 | 23-281 | 259 | DGELSARGLPAARYLLTTPEDPGAGQAKAALEAGVDRVLVAGGDGTVRMVLAALRRTDVPVGLLPSGTGNLLARNLRLPLRLRPA... |
| A0A1Q9V9Q0 | 49-306 | 258 | TRLDTARAAGLDAVLMLGGDGAAHQGVQYCAGTDLALGLIPSGTGNDLARALGVPTDPAAAVDAATTALNAHRTRRIDLGHIERP... |
| A0A011SFF4 | 9-220 | 212 | ANLPVIGIIPTGTVNNVAKGMGLQLPVENVVDQLIQSKIKACDVGEVNGRLFLSSLSSGTVPATVWTVSDEMKEKYGSLAYFMEG... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model