DPCfam | MC484881
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 9515 |
|---|---|
| Mean domain length (aa) | 232 ± 62 aa |
| Residues in low-complexity regions (%) | 2.86 |
| Residues in coiled-coil regions (%) | 0.24 |
| Predicted disordered residues (%) | 22.3 |
| Average transmembrane regions | 0.02 |
| Dominant Pfam architecture(s) | PF00443 |
| Sequences matching dominant architecture (%) | 96.35 |
| Average overlap percent | 65.32 |
| Pfam Overlap Label | Reduced |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| J5SU81 | 886-1161 | 276 | SDFAGTEQHDSQEFLSFVMDGLHEDLNRVRVKPKPVEMTPQREAELETLPPQIASDKEWAIYKQRNDSFIVDVFQGQYMNRMECL... |
| A0A179HX37 | 1693-1942 | 250 | IAFVSAIKTYDDTMIDIYNQMDVDEFYNLLFDRWEGQFPLAEDRKKLRSFYGGQLVQQVKSKECEHISERLEPFSAIQCDIKGNG... |
| A0A060T4M6 | 298-576 | 279 | FYRVLTSQARFSHLERGRQEDAQEFLGYLLEELHEECWRAINSKKDGDGDLQSGSGSSSPRVGGGQGSEWVQVTKKKYNTRYSGT... |
| Q4E259 | 1039-1188 | 150 | NEMDNAVTLEECLESTYSPDILAGDNARECSKCKARRDSKIERRPFLMPPCLIISLKRFRVHMEEASKNNTRVAFPMELDMTPYM... |
| A0A182Q081 | 250-613 | 364 | PEFRNALYNWEFDGEDEAKSIPYQLQKLFVNLQTSPKSAVETTDLTRSFGWDSAEGWQQHDIQELCRVMFDALEHKFKRTEQADL... |
| A0A0L0DM63 | 248-479 | 232 | GLHNQGATCYLNSLIQSLYMTPEFRLAIYSWKYDEEKDGPPAECIPLQLQLLFRELQSKDARAASTTQLTSSFGWTGMDAFTQHD... |
| A0DMS3 | 1583-1840 | 258 | ESVKQYTNPHQLIKTLKGYDGEVINVLIQQDCNEFFNLITDKLEQDQKFTNQSNLIHQILGGTLVNEIKSLEPEYDFRRENEEPF... |
| G4LX72 | 12-197 | 186 | EEVFSAINLAVKANDLHEALNQFVRGEVLEGDNAYYCERCGVKRRAVKRLSIHSLPPVLCLHLKRFDFDWDRQIPIKFSHYFKFP... |
| J4IAZ5 | 231-535 | 305 | FASLAKKVWNPRLFKSQVSPHEFLQEVGRASAGKFSLGSQGDPVEFLGWLLNRLHKDMGGTKKKNSSTCSIYLAVLDSREPACAK... |
| A0A139HWH5 | 2312-2460 | 149 | VDLDDCFDVTRRREILSEGNEWYCNRCKEMRQAAKTLEIWTLPDILVVHLKRFGGNRSFRDKIDLLVDYPVEGLNMNDKVGLKED... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model