DPCfam | MC410376
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 4866 |
|---|---|
| Mean domain length (aa) | 413 ± 88 aa |
| Residues in low-complexity regions (%) | 1.45 |
| Residues in coiled-coil regions (%) | 0.0 |
| Predicted disordered residues (%) | 21.43 |
| Average transmembrane regions | 0 |
| Dominant Pfam architecture(s) | PF02837- PF00703- PF02836 |
| Sequences matching dominant architecture (%) | 59.24 |
| Average overlap percent | 79.11 |
| Pfam Overlap Label | Equivalent |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| U6RE70 | 90-455 | 366 | NFKWEPISVPSEWYMESYLIEPGKWAGYYKEFELPADWKKQKTLIRFGAVESECRIYLNGKYIGEHTGSMTQFEKELTPFLLSGK... |
| A0A1M5TRJ0 | 44-441 | 398 | NLPHTWYTDEDYYQGEAVYQKKFEYMKSKDTRTYIKFYGVDKVCRIYLNGTEIGGHEGGYNIFALELTDALITGTNLLTVLVSTD... |
| A0A1B6ITK0 | 9-272 | 263 | ANYIRKMQASFAWDWGPAFPSVGIWKNVTLRAYNVAFARHVTVETIPDSSYWNVTVTLYLDVVNNVTGTLSTTLILGDTNITSQQ... |
| UPI00077AD408 | 81-440 | 360 | VPSSYNDITEDRNLRDFIGWVWYEKEVYAPRAWENNETRVVLRFEATNYNTIVWLNSKEVMKHSGGHLPFEVDVSPLLVYDKPNR... |
| UPI0004B35022 | 68-524 | 457 | DPYVGRNSRFAEWVSARSWVYRRSVSVPSLADGERAVLCLDGVDPGGTVWVDGARVGRVDGLYRRARFDVTEQVAPGGDHRLAVV... |
| UPI000B3815D7 | 93-490 | 398 | NPQYTDTDYPWDGTEQVIPHRIPVKHNPTGCYVKMFQIPQYMKGKRLILQFEGVETAFHCWLNGTYVGYSEDSYTPAAFDITELV... |
| UPI000687C2B3 | 48-424 | 377 | VNVPHTWNAKDAFDDQRGYYRGTGWYRRNLYVDAGWKGQKLFLDFEGVNKIATVFINGQKVGEHKGGYTAFSFDISPYVHYGSDN... |
| F4LJQ1 | 30-688 | 659 | HTEIPVPIPGDIHSALIHAGIIADPYFAKNELDVQWVGKEDWIISREIKIKKAFLSGQQFISFQFADTFFHVFINGREAGKGGNM... |
| A0A1G3QDS8 | 39-590 | 552 | IDDPFYRDNENTLMHIGEQHWLYETRFNAAPDILKSRVLFLRMYGLDTLAEIRLNDQLLGKTRNMYCTVEYDVHTILVAGENRLS... |
| UPI000423DCD1 | 62-438 | 377 | PVDLPHTPNIEPLLVNDQWQGDAWYRYELNYDPAWENKLVFLDFEGAMRVATVWINGEQVARHLGGYLPFTAELTDHLRKGANTV... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model