DPCfam | MC3860
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 126 |
|---|---|
| Mean domain length (aa) | 108 ± 18 aa |
| Residues in low-complexity regions (%) | 2.85 |
| Residues in coiled-coil regions (%) | 0.0 |
| Predicted disordered residues (%) | 26.52 |
| Average transmembrane regions | 0 |
| Dominant Pfam architecture(s) | PF00400 |
| Sequences matching dominant architecture (%) | 1.79 |
| Average overlap percent | 6.18 |
| Pfam Overlap Label | Shifted |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| A0A0C2F136 | 5-100 | 96 | LMFGLDLESRYLSNVPAEEEVVQLLIGTHNIKMDNQICRLSLDGEYSRISSLSFPHPAGEVRGLAASPSNANIVASAAADFHGSP... |
| A8I3K3 | 3-104 | 102 | VTYSLKYQARVLVALPCDTISSKWLVGTTALREENEVRLLQYDQDNEQLVCRRTFTHAAEVWDIAPHPNQEDLFVTVWAKGRWYA... |
| UPI0002658BA1 | 4-118 | 115 | AALIQGIELHARTLVPYKNGSDQNTFLVGTQSLRSENHIHRLTFDDEISNSLDKKSYPHPHGEIWHLATHPESPLIATCFNRLSG... |
| UPI0005F00D57 | 2-106 | 105 | DDEAPVIYGLEFQARSLTAQVAETDAIRFLVGTQSLKYDNQVHVLDFDEDNNALNKTVFFHKDGEIWHIGSSPGDKDVLSTCFNK... |
| A0A151INQ2 | 163-281 | 119 | TRALSAQTAETDIVRFLVGTQSLKFSNNQVHLVELDEETGNLKTQVFQHPIGEIWSLQASPTKPDVFITCYNSLSEEGTCQMKGA... |
| A0A0E0IFL3 | 9-114 | 106 | ARCIADVRAAAGSTTFLAGTLSLKEENEVHLIRFSPAESELVCDGLFYHPNEIWDLKSCPFDHRVFSTVYTSGEGYGASVWKIPE... |
| G1SDF3 | 1-88 | 88 | MEDDAPVIYGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQVGEIWHISASPADKGVLATCYS... |
| A0A1D2NJ17 | 2-105 | 104 | ESCAIYGLETQGRALCSQAGDDEIIRFFVGTLSPRAEGQIHQLDFSDETNQITRKIFKLKVGEVWQVQCSPWASNLLGLCYNEIR... |
| C9J0U9 | 1-104 | 104 | MEDDAPVIYGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADRGVLTTCYN... |
| A0A0R3U6K1 | 21-121 | 101 | LVGLYDSQVSPLADQTENARFLVGCQSVKPNGSQVHLITLEDGDVCQSFCLKSQSFIHPDGEVVGLTVLPAAPLLFVSVYSSISE... |
Representative AlphaFold Structure
| AlphaFold ID | Sequence Range | HMM Coverage | Avg pLDDT | AlphaFold 3D Structure |
|---|---|---|---|---|
| AF-Q5PPK9-F1 | 6-107 | 98.08 | 93.92 | View in AlphaFoldDB ↗ |