DPCfam | MC367454
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 8806 |
|---|---|
| Mean domain length (aa) | 303 ± 50 aa |
| Residues in low-complexity regions (%) | 2.62 |
| Residues in coiled-coil regions (%) | 0.01 |
| Predicted disordered residues (%) | 21.23 |
| Average transmembrane regions | 0.02 |
| Dominant Pfam architecture(s) | PF13086- PF13087 |
| Sequences matching dominant architecture (%) | 57.14 |
| Average overlap percent | 72.13 |
| Pfam Overlap Label | Reduced |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| T1H878 | 1033-1361 | 329 | SIVPFSAVPDVKAINIVGPSDEGVQMCGREQLGMHRVTVGTLGCLGLLYNMGFPRGHFTHVIVDEAGQATEPEVLIPMVFLHMDY... |
| A0A0U0SAJ6 | 198-484 | 287 | GRWQSIDGSQYTEFIRDTAGCVIGGTAWDFANGNRVPKASLDLLVIDEAGQFCLANTIAVAPAATNLLLLGDPQQLPQVSQGTHP... |
| J2L8W5 | 625-889 | 265 | ENDRDIVLSMWRRRMMLTPCAVSTFATLPGKMTCRDNITGNFQTNYLFNNIDLLIVDEAGQALPEVAGPSFALAKKAMVIGDTQQ... |
| A0A0A6P6Q6 | 1124-1401 | 278 | PCFMMSPLSVAQYLVPGQIEFDLLIMDEASQVRPEDALGAIARCQQIVIVGDPKQLPPSQFFERLVNEEDEDTIFDGQESILDIA... |
| G6CMJ9 | 588-863 | 276 | EVLGCARVVGITTSGAASRHRLMDKLGCSVVIVEEAAEVLEAHIVASLTHKCEHLILIGDHKQLRPSTAHYVLAKKYNLEISLFE... |
| H0VK23 | 492-786 | 295 | LTRTERACVRRSLEQHRLGSTRALLRQVPVVGVTCAACPFPCMSDLSFPVVVLDECSQMTEPTSLLPIARFQCEKLILVGDPKQL... |
| A0A1M2VJ82 | 440-708 | 269 | GAVEDTLIRSDELNGLGFDANRRIGKTHIMLSTLSMLSNPMLAQNGVFNYRPVEILIVDEASQIDTLEFMHLFDKFDKLRKVCMF... |
| A0A1R4GYB0 | 37-377 | 341 | VFTTTNSRLMSDIVQENINFDVSILEEAAKATGLELISPMMASNKRVMIGDYKQLPAFAEPTIKKIINNPTALDLSLVLEVLEAS... |
| UPI0009DC0A81 | 159-488 | 330 | FGAPPSGGLAPGVQVLGRGDEAELAQEIASGRAVIGATIWSLYRLISSGVLPTVDGPTAPLFDLVCIDEASQMVLGQGLMALAGM... |
| C3YVC8 | 632-982 | 351 | LSRSWDNVPSSIKNVCNYDRMTGKYSFPAKQELQKYKVLVTTLVTAGRLASANFPPGHFTHVFIDEAGHAVEPECLIALAGLLDF... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model