DPCfam | MC367454
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 8806 |
|---|---|
| Mean domain length (aa) | 303 ± 50 aa |
| Residues in low-complexity regions (%) | 2.62 |
| Residues in coiled-coil regions (%) | 0.01 |
| Predicted disordered residues (%) | 21.23 |
| Average transmembrane regions | 0.02 |
| Dominant Pfam architecture(s) | PF13086- PF13087 |
| Sequences matching dominant architecture (%) | 57.14 |
| Average overlap percent | 72.13 |
| Pfam Overlap Label | Reduced |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| P0C6X5 | 5317-5556 | 240 | FKPNNTSAQYIFSTVNALPECNADIVVVDEVSMCTNYDLSVINQRLSYKHIVYVGDPQQLPAPRVMITKGVMEPVDYNVVTQRMC... |
| R7SQU2 | 373-671 | 299 | LIIVHGPPGTGKTTTIAAALEHWERRREPAWVIAHSNVGVKNIAESLVKRKIDFKIVVSKDFYYEWHEHHYVDISDHLVKSDKLF... |
| A0A0V0QFP4 | 1-312 | 312 | MEGHQLASIPESVEQIIMIGDHYQQMRMKPEIADYVRIFYKKGEYLDHHTTKNIPDALGFDKNAYFWNLDYTVEDDFHKSKINKL... |
| UPI000425757A | 1612-1927 | 316 | PVWMMSPDAVSQALPRVHGLFDVVIFDEASQMPVDFAVPSLYRSKRAIISGDEKQMPPSNFFSSSVDTDEEEIGEELDEDASEAE... |
| A0A151MV15 | 765-1011 | 247 | LQEDLCILKEAQVVGMTTTGAAKYRQILQKVEPRIVIVEEAAEVLEAHTITTLSKACQHLVLIGDHQQLRPSANVYDLAKNFNLE... |
| UPI00093DA5E7 | 686-963 | 278 | RFLPPDFTFDVVIFDEASQVLPQDAINCIYRAKSLIVAGDENQLPPTAFFTAGEDEEDDPYAEDEIPRYESLLSLAKGNGMLKEL... |
| T1B2E3 | 11-188 | 178 | PEIIAFSNNRYYDGKIEALRDRRPSQGWSPTGTVDVRIGFRKSGLDVNEAEAVAIADLIAELIERPEYDSMTFGVISMLGAKQAP... |
| Q2J939 | 1081-1352 | 272 | RVMESFDPGADDLFDVVIVDESSQCDLLALGVLSLARKAVVVGDDAQTSPEAVGIERAKVHALIDAHLPDVAQRSLLDVEASLYD... |
| UPI0004790F2C | 683-985 | 303 | ENSNVVGATCIGINTRPKFRKLNFDVSIIDESGQIQIHNAIVPMTRAPKTLMLGDHLQIPPAANDAVVKLCRDNEVPEKQIELLN... |
| A0A1E7EW56 | 1084-1366 | 283 | ELLRSQRQRADYLINKQARVVAMTCTHAAFARSNLIRLGFEIRQYRSSDESVSRRSRLKRLCMLGDHNQLPPVVKNASFSKYSNL... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model