DPCfam | MC281638
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 6222 |
|---|---|
| Mean domain length (aa) | 176 ± 33 aa |
| Residues in low-complexity regions (%) | 1.55 |
| Residues in coiled-coil regions (%) | 0.01 |
| Predicted disordered residues (%) | 13.99 |
| Average transmembrane regions | 0.02 |
| Dominant Pfam architecture(s) | PF04937 |
| Sequences matching dominant architecture (%) | 18.56 |
| Average overlap percent | 72.2 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| R0HIV3 | 16-204 | 189 | LITLVIICHDLPFSFVEYPRVRELLKYLNPEYKTISRNTAVADVLKFHGIRKEQMKQELAGVGNRICLTCDVWRSISIEGYICLT... |
| A0A061FXL9 | 128-274 | 147 | LAEAIIKHDLPYAFVEYDKIRAWAKYVNPDVVMPSRNTTVSDVQRIHLREKEKLKQAMAKVPNRICLTSDVWTASTSEGYICLTA... |
| UPI00077D1571 | 34-234 | 201 | PKNSEKARSITKAIATFIATDLRPYSVVNNKGFRLVVHTMKSRYKLPHRKHFAEKDVPHLYEETKTSVLESMKKATRIALTCDVW... |
| A0A0K9QKE7 | 26-205 | 180 | VCYSKLAPQAVISDSFKRLMRSLNPNISFKFETLESNCLKLFEEEQLKVKDAFSKHGGQISLSVDVLYDQTQYQEYLCLSAQFID... |
| A0A180G276 | 254-438 | 185 | SRFDNQTLNKLLVLWLIRHSLPWLRVEDFLLRVSFDYTLPNADLNSRVWAASHAHQLYLEQQSQVLKAIRASDSKVSLVSGVWTT... |
| E3MEJ0 | 87-341 | 255 | AVAVKPDQSQIYLARSFATGGIPFSFSKNPEFVRFLTSKPENFVIPSPKQIKSLIQVEAIDYLEKLTHEFKKVKKYCLMTDGYSK... |
| A0A0B4HMQ5 | 156-338 | 183 | ESLLQLIVNNNLPHKSVEYPELYSLIMSVNYMAADIYPKSRAAVPKKIELAFLQAKAEIKQHLHAALSEIHLACDVWTTEHKKKA... |
| A0A1D1UX99 | 137-347 | 211 | ELYGDACVSCNIPFAASEDTRMVRLLKFLRPQLVIPSRFTVARRIVPARIKEATAEVSSKLIGQKYLTMTFDGYKNVSRDKVLGF... |
| UPI000640EEAA | 1-193 | 193 | MIIATCNPVTLVDNASFRKLVNTLDYKFSLPASAKITSLLNEEFTVLTRKLRDFISEGRRFTICLDGWTKKGLTASFLGISIVDV... |
| A0A167WHP2 | 136-234 | 99 | IARLTASAGFLLVWVDNPEWITFCAKFIPGFMLRANGRIYTIRVDNTSTEHKTAALLLVCLQAAITEVEDKFNIKVVAVVTNALG... |
Representative AlphaFold Structure
| AlphaFold ID | Sequence Range | HMM Coverage | Avg pLDDT | AlphaFold 3D Structure |
|---|---|---|---|---|
| AF-P08770-F1 | 235-420 | 88.98 | 92.02 | View in AlphaFoldDB ↗ |