DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| UPI0004720149 | 37-889 | 853 | TIKEIKHRRFHIQHFTDEEGLPQNSVKKIAADRHGYIWLGTDAGLTRFDGQHFNHYDEFASIRGIHSMEPAETEDPGFFYAITDQ... |
| A0A081C9P5 | 45-1043 | 999 | HTQVMLQDREGFLWFGSAGGGVFRYDAYELKRYGSGQDLLSNGFVYGLVEDAQEPFVLWIGTKEGLNWFDRKTGIFTYYKHQPGN... |
| A0A0J1HI35 | 54-972 | 919 | DKLWLVKEGSAYYYEPSTAKLSKLNLSQIPVEAVATTSKNVWFANRRGLYQLSEPQTPPAFTPFAHPLRLTGIHVAGDALYVAAQ... |
| A0A1N6F1T8 | 78-884 | 807 | AGYQFENFTEGNGLSDNRVTCFLMDRKGFMWIGTENGLNRFDGHSFVPYKPGIPGRSVSSPFINDIEEDAAGRLWVATQSGLNVI... |
| A0A1T5JUW8 | 32-1019 | 988 | GLPNSQINDLTQDSKGFIWVSTENGLARFDGRSFTTFRFDPSRTDALASNLVMTIKEDSHGVFWTGTSAGLQVFDPDYNTFSKFD... |
| UPI000427A744 | 4-889 | 886 | LILLFLLVSFVGFSQQTTPFFKSYTKNDYQGENSNWDISQDSCGTIYTANNYKLLEFNGDEWKKYSLPKDVVIRSTEVINDTLYT... |
| A0A1G6BGA9 | 213-1084 | 872 | YGTAQGLDINTAFTIFVDSRGLYWVSDSNSVKAIDFENNLIYELETSFRVGLGYHISEDKENRIWLSNMQVGFTIINFEEQSVSQ... |
| UPI000684A316 | 66-860 | 795 | AWRNKDGAPGEIFTMAQSADGYLWLGTPTGLFRFDGVRFEALSAVTAAALPSNDIYSLLAAPDGGLWIGLGRHGVALLRGRKLVH... |
| A0A1Q6I049 | 29-1011 | 983 | VNYSFNQIGTNEGLSSSYIKSITQDINGFMWFGTKNGLNRYDGNKVKRFDCYDLVNKRGNNNIGALYATPDGGLWVGTDRGIYIY... |
| B4D9V3 | 34-839 | 806 | GLPNNDVTCLAQAPDGAMLFATRGGLARFDGWRFRDVPMNVSGHGGSGVNAVLPARDGTRWLVARAVVVRQHPGQPDQVMEMPVL... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model