DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| A0A1S9PF15 | 26-860 | 835 | TLPLTSYSIYNGLPESTVYAIYIDSKGYLWAGTQSGTCSFDGKQFKVYDSQSGLPDNHVTAITGGAGGDVWFGHRAGALSYLRNG... |
| UPI0004683E06 | 32-816 | 785 | SNNITFNDFNIDQGISQTTIESIFQDSKGYVWLGTNDGLNKFNGYDFKVYNYEEDENSISNNFITDIKEDKDENIWIATIDGVNK... |
| A0A0N7JFL0 | 25-926 | 902 | SIFAITQDGRGFMWFGSRFGLNRYDGNQFQLYKSNASDSSTLSDDYITALQSDRKNVLWVGTANGLNRFNPKKNTFERIYLDGNK... |
| A0A1G0R7T2 | 122-921 | 800 | ITQDYNGNIWLGTEGGLTKYDGNSFTHYTKKQGLCNNIVLSLLYDKNNNLWIGTKGGGISKFDGKSFTNYSEKESISNKFITSIL... |
| A0A174KNE8 | 117-1142 | 1026 | IPAEGEEEGMRFSSIKILPDSVIWLLSENEGAVRVKTNPKDYSITTQVYATHSRGGNAVHINQVFSDAYNQEWLLTDNGLLKITN... |
| R5FA47 | 56-840 | 785 | IYQDSEGFLWLSTRDAGLARYDGYSFRYFGVGLSVVQLRSNSCRNVTEDRWHRLWVAFDEGAEVLDLHTLLPVQPKGATDRLDRQ... |
| A0A1F3CZB1 | 47-817 | 771 | IFSLFQDKKGDLWIGTIGGGINIYNGVSFKNISKENGLVGKSVYSIIQDRKGTMWIGTDKGVSKIEGKKITNYTIDNGLPDNTVW... |
| A0A1V6I8C0 | 29-822 | 794 | FKNFSPRNYGQESQNFSVVQNKEGIMYFGNANGIMEFDNSSWRLVKVPGKPMLTINSNNEVYYGGYNQIGKIVYENGHLLTKLLN... |
| F4CBY1 | 26-1009 | 984 | FRKITSSQGLSHNTVYAITQDEQGFMWFGTREGLNRFDCRHVRSYYIDAAPPGTSTNQINALLSHQKNIYVGTNHGLYRYDLRQD... |
| A0A090VFP2 | 6-536 | 531 | LYIFILLLCFCGLEVLCQSKTLIPKQNLTISDGLAHNGVTSILEDSRGFLWVGTYDGLNRYDGYDLKVYKNTLDRDVLVSNRIRS... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model