DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| A0A1F5YXL8 | 34-784 | 751 | TSDDGLPQSEVISIMQDSKGFIWFGTWGGVSRFDGRTFTNFTTAEGLIHNSVKAILEDSKGDFWFGTDKGASRFNGKTWQSFTSR... |
| R5LT64 | 29-1038 | 1010 | TEFPLLNQLPTKRIMNIFQDSEGYIWYGTEDGLCCDDGYAIHTYRSDFRSPNLMSSNQVTCITEDKHGRIWFGTERGAYILDKWT... |
| A0A0Q1HGT6 | 3-892 | 890 | VFLFIASFFFSFLLVQAQELPPVRNFSPATYGAENQNWKIAQSEDRNIFFANNQGLLEYNGEHWYLYPTPNESIMRSVEWHEDRV... |
| B1ZNQ3 | 36-797 | 762 | WTRQTGLPADKIGDVVQTPDGFIWLGTQNGLVRFDGLEFKVVPITLPYAGGQDVAKLSIAPDGALWFAINRGGFGRFDGQKFSPI... |
| A0A1K1LNL1 | 22-802 | 781 | AQSVEDFTYQHLGQKEGLSSQRIFSLQQTLDGAIWWSAKNSVERYNGVSVKHYQLGKASAVSILAGRTIKLSSSLTRQEIQNLLA... |
| UPI000479F1EC | 22-874 | 853 | VRNHSKGEYRAQSQNWSIHQDSVSGILYFGNNEGLLSFDGTRWEVHSLPNRMIVRAVFSDQRGKIYVGGYEEFGYFVTTPNGIME... |
| UPI000376507D | 46-1035 | 990 | VFKNFREVNGVALSTTLGITQDEQGFMWFGTEAGLYRYDGRTFSVYRSDKLNNPKFIRDLLTDPEGNLWIASTTSGLFRYDPNTD... |
| A0A1M4UNC9 | 26-915 | 890 | LPPVLSFTTEDYNADNQNWSVTQTKSKDLFFANSKGLLKFDGERWELLGSPNKTILRSVFAVDNSVYSGAYMDFGVWEKNEQDNY... |
| UPI000A00671B | 44-1003 | 960 | KVDDGLSDSWITEICKDSEGFIWIGTFNGGVNKFNGYSTKVYAHDKTNKHSIASNRIGGILSDSKGRLWVANRYEGGLNLYMKET... |
| A0A178IIX4 | 66-905 | 840 | TWHGEGGLPHNAINDVVRDPRGFLWLGTQGGVARFDGRYFIDYPMPGEFAQGRPEIRALAVEDECTMVMLTGHGKLVRLRDGKFE... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model