DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| A1S494 | 35-841 | 807 | GLSMNTVNDLVTDSRGYLWIATQAGLNRYDGKHFKIYTQSDAPNGPSANDISFLHLSAKGELWLLTENAGVNLYQPLTDTFKVFG... |
| UPI000B373DDE | 121-1136 | 1016 | GEQYNYRQITPRDGMLSNVRCVHAEKRGFVWIGSSTEGLMRFDNYLPRRYSSHDKGEHALPGNNIAQIAEDSLGQIWVLTNKGLA... |
| U1KH02 | 20-810 | 791 | PSHAHNFGQYTSRFSVEEGLSQSAITAITQDKHGFIWIGTLQGLNRYDGNQLINIAASKGLDEQEIVGLFNISNDELLISTGASG... |
| A0A1F3PNY7 | 29-812 | 784 | FIQNYTPTEYNFHSQNWCFTQDNRGMIYIGNGTGVLEYDGSNWRALTSGVCRALEKAPDGRLYYGGQGVFGYLEPDSLGAIKEVS... |
| A0A1T5M3P8 | 59-997 | 939 | EQGLSQNSISCITKDLDGFMWIGSGDGLNRFDGYSFIHFSHSDSDSTSISNDVIRSLLLDSKGRLWIGTYNGLNLYNSEKETFQK... |
| A0A099CYN5 | 47-983 | 937 | YGVAEGVSSSNVYTIAQDARGVIWMGTDNGLLRFDSAHFKVFRHDPRKPHSLATNDVSALLVDHRQRLWLGGEGTGLNRYRPATG... |
| UPI00094F7D38 | 29-927 | 899 | TNVNQQMVVTPSVTTFMKDVYNAENQNWDVSSSDKGVVYFANSLGLLAYDGENWELHSTDNILRSVHCIGDTIYVGGNGIMGYYI... |
| A0A160DV51 | 37-815 | 779 | TMDDGLPHNLILGIAQDAEGFIWVGTWEGAARFNGRSFTPLDGYTLPGIRLTGVRSIVRDHDDAMLFGTAQNGVFRYDGTHWEPL... |
| A0A174Q164 | 22-1036 | 1015 | LPLAGQTPYVFRHLKVENGLSNNNVKTILKDCEGFLWIGTANGLNRYDGYSFKVYQPKEKDIHSLLSNDIWNLQEDGLGNLWIGS... |
| A0A1H5ZLF7 | 42-827 | 786 | LRDQSWSTADGLPQASVHAIALTPDGFLWIATEQGLARYDGAQFTVYDRTSTPQLPSNDLCCLAVTEDGTLWVGSGDGLLALQDG... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model