DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| A0A015YD30 | 28-1029 | 1002 | YYFKQISVKEGLPSTVTSIYDDQNGLVWIGTPYGIYRFDGEKLKKYPQHHSTHTYSQLIYGVTGNGHGNVWIFTQNGTMHYNQKK... |
| UPI0008258A22 | 64-852 | 789 | SVTRLGLDGDGDLWVGTEMGLYRYDGLRFVDVGPDQGFAVSEVVALADGGERFWVATRAGLQYRHGQRFRTVAGATGPIRADRGQ... |
| A0A1H1ML93 | 10-851 | 842 | IQQDRLGRILIGSDSLQVFDGQSWSSHAKPSPYSLRSLIPDKVGRLWTAMFTDIGYFTEEPLGTFKYHSLVPQLPPSLREIGAVW... |
| A0A1G0CHC0 | 28-876 | 849 | VNGKFNTHYFSVDDFGSAGQIWAGAQGSDGNVYFGNRQDILVYNGIEWNKIKTASTGKGKKYSDVAHESMTREIYRASDDVLYVG... |
| UPI00098676E5 | 37-801 | 765 | INIPSEPYITFFDMAQDHNNVIYLTYDKGLKIFDGNRWDTVVIPNTILTRKLFVDEQGKVYVGGFNFFGYVNRNELGAYEFIDLT... |
| A0A1C5VFR2 | 34-1081 | 1048 | LAHTDANCVAQDSTGLMWIGTFAGLQSYDGYSLQTFNYYQEGHKIFKSHNRIQAMVCTKDKLWVGTESGLTCFDLNTHRYVPFYV... |
| A0A174QZS0 | 33-976 | 944 | ANAKEDDKYFRFTNITVKDGLSQGSVYAILKDKEGYMWFGTNDGLNRFDGYKYEVIKSSDKDENTLHPGIIGSIVEDDYGYLWIG... |
| A0A1V9FIZ6 | 11-847 | 837 | FTRYSMQDGLSDNSITGLVQDEHGFIWVSTPNGLNRFDGREFRKPANGSSTIDEVLKLSVTGNQLLLTTRKGVQLLNTTNEQLTS... |
| A0A0D3LBP1 | 42-975 | 934 | NQVNCFLRDSRGYLWIGTADGLNRFDGTKVKIYQHDPRDSSSIRGNTINRMFEDPAGKLWIVTTDGISIFDPVQEKFSREQAAFT... |
| A0A1N6DW85 | 29-919 | 891 | YQVENGLSHNTVFNVLQDHRGFIWMGTKDGLNRFDGHVWKVFRHVETDPSSIASNFVYTLREDNKGQMWVGTGRGYQKYNASTVS... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model