DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| A0A1B1FXH6 | 22-893 | 872 | TSKQLGIPIVNQFSATVYGAGSQNWSITQNEDGFIYIANNFGLLEFNGVDWKVHTMNKGNNNLLSVLAIGEKIFVGGQHEFGYFQ... |
| R6XKB4 | 45-1081 | 1037 | NAVLAMYQDEDANMWIGTYDGLHLYNGKNTFVFRMELDNEFSLCSNIVLEIAPAEKGYLWVATSLGINKFSLRERRVVESYMQYV... |
| A0A1N6D480 | 33-780 | 748 | LPVQNVLQMEQDTLGRMWFSTPMGIYYSDGIETFPLPDSILKEFNYRISIHKDENGIIWLYNSNGLPKLVKGGYGSWEFVDLPVK... |
| A0A1Q6FVE5 | 41-797 | 757 | KEGLPPTTIEDICRSDDGFVWLATWAGIYRFDGSEFVRFSPEEDARSIRFTRIEADNSGTVWALGHDGSLYSVGQGSSSMERHTP... |
| UPI00041AA10A | 57-874 | 818 | HLSVSQGLSHSGVYCFLQDSKGFMWIGTEDGLNRYDGTDFKIFRHDPENEKSISHNEVWSIQEDSQGNLWIGTWGGGLNRFNWDT... |
| A0A0D6TL76 | 19-755 | 737 | IQSQQYNFEIINQEKGFPSSSVNKIFKSSDGLFWYGTEGAGLIRYDGNQFVNYNKFKGLENFFITDIIESDDKNLILTTKFRGLL... |
| UPI00094FB4ED | 9-949 | 941 | IIALIVVHIGVVSYAQIKKIGLAEVEVFNRRQYNGATQNWKITQSEYNYIYAANNDGLLEFDGETWRKYINTGNTIVRSTYATHN... |
| A0A137RF73 | 3-824 | 822 | STAQRYQFKKYKTEEGLVNNETFAIIQDSNNKIWVSTTGGISCFNGKTFKNYTTEDGLASNIVFSIFEDSKGRIWAGTLDNGVSI... |
| A0A023BXA5 | 41-1056 | 1016 | IPTKTVQDSFGNIWMLCSDGILVYNGYDYKLIKNKMIFPDIQHNDFINNMLVDYKKNIWVTSQFGLISKYIAIDNQFEDMTVLLP... |
| A0A1M7FEQ3 | 17-935 | 919 | SAATAVIPDMKFRRMDARDGLSNSQINYLFQDSRGFIWIGTSYGLNRYDGYRFRIYYSNATDTTSLRNNLVDQIWEDADGMLWLK... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model