DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| A0A1K1MLX9 | 14-813 | 800 | TTRDGLSNNSVYDIISDKDGMLWIGTWDGLNSFDGHTFTVYKHDLEDNSSIAGNVISAFVKDEHQNIWMLTDNKAVSRYLGDGRF... |
| A0A098LII6 | 19-816 | 798 | AQYPQYIAYDNESSLPSNEVYSILQDQNGFIWIGCGAGLYKFNGIRYIPYRSDLQKSRSITGLTLSSSGTLYCFNFKSQTFYIEG... |
| UPI0003456FF3 | 48-926 | 879 | FMLDAWTTEDGLPNNSVMAHLKAGNGYFWLITYDGLVRFDGLKAKVFNQRNTPSFGTSSLLTVFEDSRERLWIGSNGKGVLVYES... |
| A0A1W9RAA1 | 15-882 | 868 | ILITCFSFAQETGTPFITNYPQNEYNFHNQNWGVVKDNRGVLYFANGNGILEFDGTDWRRIFVENRYRVRSIAIDDNGIIYVGAS... |
| A0A176S3B5 | 39-599 | 561 | GLPSNDVNALLSDDQGGVWVGTWGGGLAHLKADGYWEVFNSNLPSNWVSALLSDEQGGVWVGTSGGLAHLKADGYWEVFNTDNSN... |
| A0A1W2H1H7 | 101-987 | 887 | GNVWINTSTSLQYDGSRFKEFDVIGTDLTTRSILIDKNDHLWIHGFKTANDSIEDRIMIFDGIRCKDVAGLKVKTKVSKTSLGLG... |
| UPI00068493C9 | 47-648 | 602 | EDGTIYIANFEGLLYYDHAQWRMIHTPGISRVTVIYRDSNNTIWVGGYNFFARLQKRANGELMMQTFGNDGMFNGEVMEIFEDEG... |
| A0A0R2X2U5 | 69-1055 | 987 | TINEDLTNQGITSIFKDNDGYVWIGTYGDGLFKYNSINFKNYKQQWNSKGSSLNSSIIHSILQDKQNKIWVGTQNGLNLYNSDFD... |
| A0A1M3HBN4 | 1-937 | 937 | MWIATDDGLNKFDGTNFTVYRHQAGDSASLRANEILALYEDKAGNIWIGTSGGALSMYDRRRDKFIHYPVDGGGDGFLPNAVVRG... |
| A0A101W8J6 | 30-912 | 883 | YINNYTLYEYKAGNQNWDIAKSAEGKLFVANNNGLLEFDGINWNLWEMPNKTTIRSLLVYQNKIYVGSYEEFGYFSRNNKGALKY... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model