DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| UPI000A00B21B | 103-918 | 816 | QQLRHTAWTVREGAPPEIWALAQSHDGYLWLGTGSGLYRFDGAHFEKFRPFQGEHLPSLNVNSLLATRSGDLWIGFAAGAVARLR... |
| A0A1F3F0X1 | 32-842 | 811 | YSVEKGLPKSDIFSIIQDSRGYLWLGTDGGGACRFDGKQFVTFNKRNGLIGQVVRAITEDSRGNIWFGTDDGISVFNGFKYFNIT... |
| A0A1M7LDS9 | 15-882 | 868 | FFLLTLACAAQALNPATALPDYHHTAWTSKDGAPAEIASMAQTSDGRLWMASPFGLYYFDGVRFTQYKLPHGANFPVFMVRAHPN... |
| UPI0009E784ED | 25-927 | 903 | SKYVFTRLSVKDGLASNHVYSILQDAKGFMWFGTAGGLQRYDGKKVIMFRSHAGAGEYLPSSAIPQIFQDVHHNFWVRYGSEVGI... |
| A0A1S2VGZ3 | 80-1043 | 964 | CQDSRGVLYIGNQHGVLEYDGSTWNVIPVQGQVVRAVAADTSGRVYVGTDTDIGFLEHTLSGRTDYKSLKKHVPASSVPPKKVTR... |
| A0A1M6L232 | 7-902 | 896 | LYIFFLFFTLVIKAQEVLPLVKNYTKQDYNGDNQVWNLTQGKDNAMYFANNGFLLRYDGVKWEKYTLPNQSIIRSVYSFEDKIYT... |
| A0A1F3DAF1 | 16-805 | 790 | TSQAFPQSYNFRNFNSEDGLTQSYVYSIIQDVQGYLWVGTDNGLFRYDGFKFENYPTSDSLADNFIANSISDGESLWFGHRNGRL... |
| A0A1T5BCJ0 | 26-835 | 810 | YGQRYNFKNYDIEDGLIQSQAQRIFQDREHNLWISTFGGISRFNGRDFTNFISSDGAAGTATAMAEDGAGRVWFASRTLSYFDGQ... |
| A0A1G8FTE0 | 29-1017 | 989 | FRTISPEDGFYYDGVSSIVQDKLGYIWVVMANEVYRFDGYNYKRYYSQFEIPQNIGKLYFESVNTDSDGNIFVASNNGLFLFDWN... |
| D1PXB6 | 55-893 | 839 | LNDISIDCSGRLWVAMSSGVYRIDADNKVVSVLSGIVANTIRDTGDTHYIGTNSGVIALSNSVRGIRSHHLLSGVSVQTLFFDTV... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model