DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| A0A120MXW8 | 21-583 | 563 | FAQSNQYQFSRLNISNGLSHNQVNCIFKDSQGFMWFGTASGLNRYDGYTFKVFKHDDNDKNSINNDFINDIFEGPDSKLWVSTRG... |
| UPI000B39D7F2 | 27-992 | 966 | YSTDNQISSSLINDIYQDKEGFIWISTEYGLNRFDGNKFITYNHIDEDSTSLCNDYIHQTFEDSKGNLWVSSMTGLMKYDRNTNS... |
| K6YN29 | 37-881 | 845 | ENGLPQSSAKTILQDQQGFLWVGTEEGVARYDGYEFKVFKHNLENPRSLSNNYVTVIFEDRQGNLWVGTRGGGLNRFNPATEQFT... |
| UPI00034CE870 | 35-862 | 828 | EAGLPHPIAMALAQDSDGFIWAGTQGGLSRYDGYRFRTFLHQDGVPGSLPGNVITALVPASGGRLWVATATGNVARYDPATGQFQ... |
| A0A136NDN1 | 31-690 | 660 | TSLREVKGISLGNNMVWSASSGGLFSFDAGNLSSVRKYTSLDGLRSNELTAVNVGNDGKIWAGAFDGSISVYNPQNQVWQQITDI... |
| A0A099LA57 | 43-1008 | 966 | SQLQFTNLNDAEILSHPAVNTIVQDKMGFIWLGNQNGLNRFDGISSKIYTHVPGDITSLASTWVNKIYVDSEERLWVLGNGGISL... |
| A0A0Q6SHK1 | 46-856 | 811 | WTSKDGMPGDVWEMTQDTGGFIWFATPSGLYRFDGVRFERIHALGGTPLLSNAVATVRAFPDGALWIGYRFAGISVYRAGRLRHY... |
| A4CIC7 | 12-875 | 864 | RNYGVNDYQTASKNWGLDTDSNGELYAANNKGLLHFNGEHWELYRLPNNTVIRSVACVGNRVYTGSYEEFGYWEKNRMGILEYTS... |
| A0A1B6Y5G5 | 3-805 | 803 | IKICVAIFFGFVFVGNTTGLYSQQTTISPYEYLSPDWFTPFSGIMELSNKQLLITGTGYTRIYDGGQWNKVDNLIGKNVLTYTEY... |
| A0A1M5CSY3 | 29-899 | 871 | PPILNFTPEDYTAENQNWAVAQGDQDFIYVANNSGLLEYDGAKWSLYKSPNNTILRSVTVVGNRIYTGSYMEFGYWQHANTGLLE... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model