DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| UPI0009FAEE1A | 30-774 | 745 | TKQLLMPFVKNFSKLEYHGANQNWDVCQGVNGVMYFANSDGLLEYDGASWKLYPLPAEQIVRSVAVDTAGRVYVGAHEEFGYWEK... |
| A0A1M6B613 | 40-992 | 953 | VAFYHYGIENGLPEARIISISQDANGFIWMAGESRLFRFDGQQFKAYQNTGNDFSVIPPGKITTLFTASDGTLWLGSDNGISWYN... |
| A0A1I2PB27 | 30-949 | 920 | FDGINSRNITVEEGLSQATVETILQDKKGYIWIGTNDGLNRYNGYSFEVFREDKNDKNSIANNYILALEEDKDGNIWVGTIKGLS... |
| A0A1M6NN74 | 47-897 | 851 | LNNNKITAFCQDHDGYMWIGTYNGLHRYDGQNYRLFLHNGDSSALKSSRIKCLLEDSRKTLWVGSMDGLSRYVLTQDRIETIEVE... |
| I0AM15 | 23-1046 | 1024 | FRNYTVQDGLSNSKVNCVLQDRNGFIWFGTEDGLNRFDGYEFKVFKPSSEKNNFISRDIWSIYEDSDGNLWMGTKSGDVNKLDLS... |
| UPI00094F5019 | 52-1191 | 1140 | IWLGGENGLYGLVGNETIHLHSKNTVLNSSYITDIKEINKNELLIAAYGDGLYLFNGISKRFKKLNLPSQLLTSYWKFSSNEDVI... |
| A0A136LBE8 | 3-823 | 821 | RDSKGRIWVSGYTSGVSMFEGSKWHRYSVSNGLASNYKGKIGEDKDGNIWIGHFKGSFISKISKNDVKVYTLPSNNELYLYITDN... |
| A0A1M3E405 | 39-794 | 756 | VNRLSINHQSYIFLATDKGVYRFNGAKFSLVRSSIKSPVTALAASGDQLWLGYKNGLLGMLGEDSVIPFKLPEPYQNAEIRCLLP... |
| A0A150AJ59 | 22-1050 | 1029 | NDGLSINEVTDILQDQGRQYLWISSQNGLNRYDGHEIKRIYLPQKNNVSNYISDIEEDHQHTLWLATNNGLGRYNYMTSEWYEMP... |
| A0A1M3G2S7 | 19-851 | 833 | ENYSSDHGLSQLSCYALAQDSNGFIWVGTQDGLNRYDGRRFKVYAQQNEAGQKLPSNTIFTLYADAARNLLWVGTSGGLCLYNTA... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model