DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| UPI00036810A0 | 24-919 | 896 | FERIPNELGLSQNYVSAICQDQQGFIWVGTKSGLNRFDGYAFTTFTHSPADSLSVSNNEIETLLSDSWGRLWVGTSRGLNRFDPI... |
| UPI00047F4184 | 26-942 | 917 | FHQVGHASSIPDNVVTSIAQDQQGFVWIGTPSGLLRYDGYQFLLYTHNSNIPDGLPGMFVTDIMQQYNGNLWIATDPGGLAVYDP... |
| A0A1N7NAM1 | 34-821 | 788 | GKLYMTRFYDNQNGLPQNTVFDIEKDDYGFLWIATEEGMVRFDGSTFQVFNRDNNPLVVSNLFYDVYRVEGEGVWAASDNSLVLF... |
| UPI00048BFBA7 | 21-844 | 824 | LKFKTLTTKEGLSNNSVNDIISDDKGRLWVATWDGLNRYDGNNFKIFKHVDNDTTSLPGNVIYALQKDTNGSLWCLTDNNSVSKL... |
| F9D2P1 | 65-1064 | 1000 | GLSQITVNSLYMDENDELWIATREGLNHFNGNRISVFKKEKDHPYSLPSNSIERITGDGRGRLFLLCTEGVACMNLRTRRFRTIV... |
| A0A1E4IL57 | 53-827 | 775 | GHGGSVQNWAVVQDRRGVMYFGSTDDGVLEFDGASWRTIATPNRSTIRSLALGRDGRIYVGAIGEIGYLAPDANGALQFVSLLDR... |
| A0A1M3GFR4 | 37-947 | 911 | LSQNSVLAITQDNRGFMWFGTRQGLNRFDSRKVVVYKNIPGDAGSLSNNYILSLLTDKRGRLWIGTLNGLNHYQPSSDNFNTVAF... |
| A0A1M4VFN1 | 32-553 | 522 | LLPMKDVSMVIRDSEGYLWYALYGGGLCRYNGYQMDMFRSDYKGGMLIGESNTVVCVVEDKSGNIIFGTHRGAYVLNKSDFSVIP... |
| A6KXP0 | 27-818 | 792 | PTIDQLPVNAIHRVFRDSEGYMWYGTVNGLCRDDGYHVKVFRSDIETPGLLEDNLVECIAEDKKGNIWFGTDKGVYILDKSDYSV... |
| UPI0005C6CCE3 | 23-1017 | 995 | SARNYALVSYNADNGLSHNTVRCIAQDQRGFMWFGTADGLNRFDGVAFRVYDSEDLRHGLLNTSVHALCADRKNRLWVGTEQGVY... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model