DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| UPI00040EE419 | 9-901 | 893 | LIINTLIIFSTTAQELSPPIHNYSSQTYQAASQNWDISIDDRGVIYAANNQGLLSYDGQRWELFSLESGSVIRAVHPHKGKVYTG... |
| UPI000A172754 | 33-837 | 805 | AKMNNVMLERVTVEDGLAQASAQAIAQDKQGYIWFGTENGINIYDGYKISTLMGPDNDFNKFSVNNIYVASDGLVWISLSGKGLY... |
| A0A0Q5T7G7 | 17-770 | 754 | LSAQFIFQNLNEKDGLSSKHVRCIYKDKDGLVWIGTANSLNRFDGNFIKRYPGFDGQKNLYVNAIVPFENDNKLLVASSTGLFTF... |
| A0A0R0CYZ9 | 31-800 | 770 | LAHDRWTMDDGLPFPGGYELAIDKDGFLWLGSIAGLVRFDGQHFVVHDRSNTPAMQGNLIRGIASDGTGRLWVGTERGVIFRQSG... |
| A0A162PHG8 | 22-792 | 771 | AQLYFTGRTLSTANGLSDNRITAIYKDQTGYIWIGTKNGLNRFDGFSFTIFKPQKGNSISNEIINCITGDTEGNIWVGTMSGLNK... |
| A0A1B6Y656 | 35-886 | 852 | YTIRNYGVDDGIFSQQVYKIQKDKKGFYWIVSNSELLRFDGLGFKDFDKGSDGGTLYDMDEDSKGNSWIPSIGAGLYKFNGDSLK... |
| A0A0C1U9Z8 | 24-850 | 827 | YDVSDGLVDNSVVSITQDRQGFMWFGTREGLSRFDGKTFISYRPSSDLSFFPREAESLTEISAGHMAYVTINRLLMLNTKTKAFY... |
| A0A1F3LCP0 | 26-798 | 773 | VFKHFGIDQGLPSSIVYNTFQDSKGYLWFSTEMGVARYDGFNFKIYNSEDGLVDDIVFQVYEDYAGRIWFRNMAKQLCYLENEKI... |
| A0A1M3HBT0 | 1-916 | 916 | MWIATDDGLNKFDGTNFTVYRHQAEDSSSLRANEILALYEDPGGNLWVGTSGGAVSQYDRRKDKFIHYPAGVGGNGFLSNAVVRS... |
| A0A1T5JFV2 | 38-859 | 822 | QNFLYTTRNYTAVDGLPQSQVTSVVEDDNGYLWIATQGGGLARFDGKEFKVYTTKDGLFSNNISSLLFDHDQNLWILHAHGITRF... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model