DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| E4MDK6 | 36-526 | 491 | RIQTLSMDEGLPHSDVNAITQDRDGYLWFATFSGLSKYDGYRLQTFRTDNSDLTSDRILCLFVARDSSLYIGTESGGLNRYDPVS... |
| A0A1V5TP16 | 24-1052 | 1029 | LFKSLTVQEGLSDEDINCIIQDKKGFLWIGTESGLNRYDGYEFKIFKYNQNDKNSLPNNSIWSLYEDKKGNIWIGTKSGDLVRFS... |
| A0A098U344 | 35-803 | 769 | EGLGNLSVTVASQDTAGYVWIGTQNGLFRFNGTGFRRYGPAQGFPDKIVTALVGGGATGMWAGTSENLYRFDGRRFHPVRFDGKP... |
| A0A1P8E0C4 | 21-941 | 921 | IESAARDKQGFIWFVAGSLLYRYDGVAIKPFNELYTGPLGFTEVNKLTTDDTGRLWLETRNGLFIFDTQLWRFIEKDTFSKGLVG... |
| A0A1U9KP44 | 23-798 | 776 | NGISDQEIHSISQLHDGRLLIGSENGFSIWNGYKSVNIDNSNNPRLRGFALWSLVDDHDTVFVSYLKQIAVFRPASSLSTFRNYK... |
| A0A1G0CK31 | 22-868 | 847 | VANYTRENGLISNEISDVAYDSKGFLWIATDKGIDRFDGQRFIHFQHDPDDKNTIGANRIMRISYDPKGYVWAATMNGGLIRIST... |
| A0A173VQF6 | 37-670 | 634 | YGKGAQTWKIAPYDDKWVFFANKNGMLQFDGNAWNVFPLNNTSDVRSVLVSTAHNRIYAGGINEFGYYEPGRDGSLKYYCMSDTL... |
| A0A0C1KUF8 | 46-883 | 838 | DAAARQFHSTLYTVNEGLPVTYVFCIYQDHYGFIWAGTPNGLSRFDGRRFVNYDMSHGLPSLRVDCVFQDSRHRLWVGTRYGMAQ... |
| A1ZP10 | 33-864 | 832 | ITKFTTKSGLSQNTIWYTIQDKQGFMWFATGDGLDRYDGKGFKYYTPQTSGLSSSYIREIYQAKNGIIWLGSSDTGLDRFDPKTN... |
| R5RRM1 | 32-1059 | 1028 | PSKLLPTNAVRVLFSDSEGYVWIPTYSGLVRYDGSSTVVFGMNESDGEKFDCHINVVCESEGNKLWIASEKGVYTLDKNNGQISF... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model