DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| A0A0P0GSR5 | 28-1087 | 1060 | SQYNFKFITENAGLPYSFVSDIFKDSGGYVWVATHYGIGRYDGYQFLNYGTQTEPIRLKNDFVHKICEDNFRRLWIASEGGIDIL... |
| A5FI66 | 30-1034 | 1005 | FDHIDYDVSFSQSMISSIHQTKKGFIWIGTANGLISYDGYNFLRYVYNKDILNTISNNHINVILEDRQKELWVGTNNGLNLFNKN... |
| A0A0S8JMP4 | 25-1026 | 1002 | TVNCVLQDSEGFMWFGTSIGLYRYDGLDYKIFRHNPFDSLTLSADMITGIAEDSANILWIASGESLCCYDKYHERIERIIDTVGM... |
| R6DHY9 | 38-1043 | 1006 | AQDIEFRHLSTDDGLTHFSVISLYQDERDFIWCGTRNGVSLYNGREFKEYRYHKGDTTSLFCNTITAITGDRAGHVFLHTVLGIA... |
| UPI0005C445C0 | 9-1000 | 992 | MWFATLNGLNRYDGYQCKRYTTIQLGTYNNCVNTIAEDASGIIWLKTPQYYFFYNRELDKIDSDIHSQLSPLGIEGKVEMLCVDN... |
| A0A1S1Z1G0 | 80-1092 | 1013 | LDVRDVFKDSKGFLWLATSDGLVRYNGLDSKVYRVSSSANSISSNMIRKISEDQLGNIWVSTFGKGLSRLDVKTETFTNYSIKSD... |
| UPI000A2DDC87 | 29-850 | 822 | SVQDGMVSNNVRRIFQDSRGFIWIGTWEGISHYNGHKFTNYSTLNGLSHSLVNDFFEVNGKVFATFNNGSIDCIDNGRVTKFSKI... |
| G2LH54 | 250-948 | 699 | LPSNDVQTVFPDRDGSVWFGTAAGVCRFDGQQFWSSEAPESPLSPLAGKSVTALARTADGTLWFGLPTGLAALRPTSTTAMALSE... |
| A0A1F3E2C1 | 43-921 | 879 | IYRDSLGFLWIGTPAGLAHYDGKNFKIFSLLDGLAGNNINDITESENGTMWFSCYKGGISKFDGQKFQSLTSNDGLINNNVTKLF... |
| F3ZR03 | 38-540 | 503 | SFVDISDNIPSKEIQNIYQDREGYMWFATYNGLVRYDGFSYLNTKLGYSAEKGAINNMVNYVVEDFNSTLWVGTNAGLVLLDKVS... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model