DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| UPI0009DFC25C | 41-910 | 870 | CFVLAITWALPARGQDIPGYRHRHWSASDGAPMSIRAIAQAPDGYLWLGSANGLYRFDGIAFQLVRPAKFDRFRSSRVTALAVAP... |
| UPI000B35F54E | 127-825 | 699 | SQQQLWIYGQHQFYTFDPLTQQHQSYSVSNITRGSTQDNQGIQAAIYVAGKWIVATHDSLFYLDKNGPRRLLARKFTNIQLLKFD... |
| A0A176TC39 | 32-1032 | 1001 | ISQIAHDSIGNIWMSSGAGILRYNGYSYNFIDKKEVFPEVDSNDRIHQICTDYYNNIWIKTTKGLLTKYNSRNGVFTTLDYLIKE... |
| A0A1T5IFP6 | 19-1000 | 982 | AFAQPRNFRHYRTEDGLQSNTILSCMQDSNGFIWIGTKDGLSIFDGSEFRNFEAAGHKSCMNGRIQSIVEAPDGKIWIDSSNGIG... |
| A0A1M6R9W6 | 6-823 | 818 | CLTALLCISLTSQGQQGDLFLTHHSLSIEGMDNLNFDITSNSKGQLCIANRSGILFYDGDQWDYVSTPSSALSVTFDKDDNLYVG... |
| A0A0E9MVI3 | 33-787 | 755 | QTFDHGSGIRPGNNLAMAKDSKGFLWILYPRNVQRFDGRQATSFKTANDLQYLFCDQAGRIWVSAVRQLFLFDEATAQFKSFPLP... |
| A0A1R4KGS3 | 7-906 | 900 | CLFLFCSMWITLSASPYYFNHFQVNNGLSNNAILCSVQDNDGFIWFGTRDGLNRFDGYHFKTFLHESDNEKSLGSNLVHSLMVRK... |
| A0A179DH15 | 29-967 | 939 | FRNYSVADGLRSNTVWSITQDDQGYMWFGTKNGISRFDGYQFKSYQFDKQNKNSLSDNFIHSILKFDDETFWLGTESGVSILNLK... |
| UPI0009DE560E | 64-968 | 905 | STLLTAMASDGEGFLWIGTQNGLSRWDGHEFRTYVGESGAPGRLPGSQIQVLHTDKAGRLWIGAASSGLARYDSATDRFVTVPTG... |
| A0A1F9YNI3 | 20-532 | 513 | VHKGYASITADKEGNIWFGTKGGISKFDGVNRTIYTEEVGLASNDVSDIAVDLDGNIWFGTLQGVSRFDGTNWTTYDTIDGLAYN... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model