DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| B1ZP33 | 71-915 | 845 | VSTFDGERWKHYPVPGGTVVRSLAVGSDGRVWVAALNQIGYFERLPNGDLGAYRSLLAQLPTANRELGDVWHVFAHPAGAVFVTS... |
| A0A0N1JTA5 | 27-872 | 846 | YQHDMWTANDGMPADIWSLAEDNQGWLWIASMAGLYRFDGIHVQPFQPAPGEALLSEKIGALSALPNGDLWICYAQGHALSLLRN... |
| R9I0F3 | 31-1004 | 974 | EQISSNFITSFAEDPKGYIWIGTNHGLNRFSGSNYTVYYAQEESTALNSDYVDNLMFDANNRLWMSNECGLCVWEDGIFRHPQQV... |
| A0Z1J8 | 41-967 | 927 | LSQRIVTDTYQDSTGSMWLSTQEGLNVYDGRRVEKYLSLFVEENGLPPGGLLGTKESADGTLWIATTATLTKFDRTKKEFLIPAG... |
| A0A1V6JJP8 | 28-879 | 852 | VRTFTPEEYDASDQNWVVVQDHRGIMYFGNNDRGVLEYDGKTWRKIAVPNNAPVRSLAVDSLGKVYVGASGEFGYLSPNQRGKLE... |
| A0A1M4U782 | 34-895 | 862 | LPFITHYTRHDYKAGAQTWSIAQDERGVMYFGNNSGLMEYDGESWNLIPMPNDSYVRSVFKSSDGKIYAGAYNQFGFISADEKGN... |
| UPI0004A6EA9B | 21-1017 | 997 | QYVVEQISNIDGLSNSSINCLMEDSHHILWIGTWDGLNAYDGREVKTYRYHKDSKSISHNIIRSIVEQDNMNVWITTDGGLNRWC... |
| UPI000A06D0DE | 48-885 | 838 | AADGAPTETWAMTQSTDGQIWMGGPGGLLRFDGVRFERFPASRSTPFPAGAVLRVMAASNGDLWVSFLPRGLVRIRQGQVWQVPE... |
| UPI0009DECAF1 | 27-952 | 926 | RHYTVENGIAVNAVCCFYQDSQGFIWVGTINGLNRFDGRTFKTFDLPKGKHSSFVGNIIFSIVEDQNKCLWVGTDLGLMILDLQT... |
| A0A1N6G2L1 | 21-1006 | 986 | SQNAVFNNITSDEGLPSTSVTDVTQDTYGFIYLGTWEGVFQFDGKNFKKIFYEGRYVEADEKGGIWIEAEDGDLVYYDSNKDSLS... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model