DPCfam | MC250234
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 5121 |
|---|---|
| Mean domain length (aa) | 860 ± 130 aa |
| Residues in low-complexity regions (%) | 2.55 |
| Residues in coiled-coil regions (%) | 2.43 |
| Predicted disordered residues (%) | 17.99 |
| Average transmembrane regions | 0.93 |
| Dominant Pfam architecture(s) | PF07495 |
| Sequences matching dominant architecture (%) | 6.92 |
| Average overlap percent | 7.07 |
| Pfam Overlap Label | Extended |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| UPI0009FBF3B7 | 13-798 | 786 | LTSFIFLSCFTMGQAQYDFHNFNSEDGLPSAEVYFCLQDNGGFMWFATDQGVARYNGFEFEIFTIRDGLTDNVIIDLEKDQFGKI... |
| C6W279 | 38-1016 | 979 | FTSLTSMDGLSSNTVTAILKDRYGLMWFATDDGLNRFDGTDVLTYRHMKNEMSSLRSSDISSLHQDRQGRMWVGTVEGGLHLYNR... |
| B8KNE1 | 29-805 | 777 | GLPSDRVWVSTEGPRGYLWIGTQGGLARFDGVNFKAYNQQSHPAFKASDIRALEWTPDGDLWIGTYGGGAVRMRGKEFTTFTTDD... |
| A0A088F2G3 | 33-982 | 950 | RNYTMDQGLSSNRVYSIVQDSVGFIWVGTNDGLNRFDGTRFRNFRYDSKSSNCISSNSVMDLLIASDERLWIALDNGVDIYDPYS... |
| A0A1F3MF62 | 217-1176 | 960 | ITEDTNGTMWFGTHTGGLISYNGSFFNQYTMQCGLSSDMILSLLIDKNEHFWIGTHGGGADYFDGKKITRYTKRQGMPSNTILAI... |
| I1DSU2 | 13-690 | 678 | SVMALHHDSAGRLWVGLEHDGLLMRDPTTGQWTAISISSYAGGVASNEIRSVLSVQNGDVWVGSQHGLSQLSQVDGSWQQQQSFV... |
| UPI00047D6D51 | 39-931 | 893 | NFSPKEYKAYAQNWEVTQDERGIIYVANFDGVLEYDGVRWNLIPVGEELSVNALQGDKNGRIYVGASGDFGFLAPNAQGKMQYHS... |
| UPI00068842B6 | 1-487 | 487 | MWAASLNGVCRRTDQDNFVRVPFVRETGNCNNLAQDSRGRIFVCNSGGVMVYDAARERFEPAIDADLTRGSFMRLVIDRSDCLWV... |
| A0A1V3N3W6 | 22-999 | 978 | LLFSRLTSEDGLAPGAVLSITQDANGFMWFGTQNGLTRFDTHRFKTYTRKLPITASTQGNYITQLLYDSQDRLWIGTRNGLNSYN... |
| UPI0004E15E1E | 42-979 | 938 | RTWTSDNGLISSATLRVRQAADGYLWIATRDGLSRFDGVRFLNFLPGVTPGYSGVPVRWLLPARDGSVWAATDAGVSMFRNGQWK... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model