DPCfam | MC239920
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 1131 |
|---|---|
| Mean domain length (aa) | 408 ± 53 aa |
| Residues in low-complexity regions (%) | 12.4 |
| Residues in coiled-coil regions (%) | 0.0 |
| Predicted disordered residues (%) | 11.66 |
| Average transmembrane regions | 4.27 |
| Dominant Pfam architecture(s) | PF03703- PF03703- PF03703 |
| Sequences matching dominant architecture (%) | 53.73 |
| Average overlap percent | 86.17 |
| Pfam Overlap Label | Equivalent |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| U1NVS2 | 26-265 | 240 | VAVLLFVGAVGLVGLVVLSWLVGAASAVVNYWGFRLTRSATELRYERGLLQRYSGTIPFDKIQTVTITDNPLKRQAGYATLAVET... |
| H6RDK6 | 34-466 | 433 | LVHPVDEVIRFIPVVLGTLILGTSSGNHGWSVIPLVAIVGYALTRWFTTTYRVGPTHVELRTGLVQRKRLSVPRSRIRSVDIEAD... |
| T5K0S3 | 53-441 | 389 | VMAGGALLLAAIRYWRFTYLLTDGGVTINKGLVNRQVRHIPYRQIQTIQRQQSWFLQPWHLEQLTIDTAEKVSEDDLIQLPLVRQ... |
| A0A090QIB8 | 22-356 | 335 | SDEEDTQIVKNDSKIILQLSFIDLLKVGITQNHLRSGGLAIGVIIGFWYKIKDVVENFFGDIFESVDVDIEQAVKQPDAFGSSIL... |
| U1QIH3 | 36-463 | 428 | GRTLVLAGVGGAIALALGYEFAYYQRYQYTFTDDTFDIRSGVLSRREREIPYGRIQNVDISRNIVQRLLGLSAINLETAGGGSTE... |
| A0A1M7B8U7 | 44-479 | 436 | IVVTFRGWDRLGFVEPLLGLAVTVGVFALSAWSWATTQYRITPTHVELRSGILVRKHRAVARDRLRTVDITADVLHRIAGLAVVA... |
| UPI00047184EF | 56-337 | 282 | GSNRLGMIVFGIGVALVVLLVASVLSYINFRFRVNRNAFLIHRGVLQKKRLTLSFDRIQNIAIKEPIYFRPFGLVTMALESAGSA... |
| UPI000A056506 | 67-519 | 453 | VQNALYIIPALAISAQSTGILQTRWFFPVLAALLVLMIGSGLISYLFYQFRVRNGHVEIRMGLLRRRHINLPFWRIQNIKVERPF... |
| UPI0003614B0A | 32-434 | 403 | RFWSALLAVIVAIAINQRELASGILGVIRDYESFELVPVLLSVAGTVALLGFTWALSRIWWKRNGYRLGSDEVVVEKGVFTRQSR... |
| A0A0A3J7W9 | 37-454 | 418 | FNSQQTNEINFWSDIFPILIITVPVFFYLIFGIIKWWTFVYWFEDDELRSEYGLFVKKKRYIPFERIQSLNYKEGIFHQIFGLVQ... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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HMM Model
Not available
Download the HMM file containing the hidden Markov model