DPCfam | MC160046
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 989 |
|---|---|
| Mean domain length (aa) | 261 ± 30 aa |
| Residues in low-complexity regions (%) | 9.2 |
| Residues in coiled-coil regions (%) | 0.04 |
| Predicted disordered residues (%) | 9.53 |
| Average transmembrane regions | 3.14 |
| Dominant Pfam architecture(s) | PF03186 |
| Sequences matching dominant architecture (%) | 83.78 |
| Average overlap percent | 92.29 |
| Pfam Overlap Label | Equivalent |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| A0A0N0JWQ8 | 35-309 | 275 | FAKNFNAGAKSHGRLAWVLYAAGVGVGVTLIWWGATKLHPALGFAVNVIALLFTMGFRRFSHAFTLIEDAVREGDADAAYKVMAQ... |
| V5SE17 | 28-301 | 274 | HPVGWMSALVRRAAAAWNERSLSLSQRRLRGVLALATVLLVGTSCVLLLDRTLDLLLPVAVALIAKAILASTLIAGRSLDERVSA... |
| A0A1J1DSP3 | 26-297 | 272 | LFGDPKFPWPHPVCVAGRMLHCLEAPARRWDTPVAGRAAGFICLFVLIAAVGFAVWLLLVLPWLGVAAAVYFAWAGLALDSLVTT... |
| Q58710 | 11-283 | 273 | IIFDRIIGELPESIHPTVWIGKLIAFLENIFKSTNCKNKYRDFLFGSLTTFITLLVVGVIAFFVDKCIMLLPFPLNYIIYGFLLS... |
| UPI000404697D | 1-373 | 373 | MKFLVLFIAVLLQQQVPAASRLNQRLGFDRFIGLFERWSGFQRLGAVAQFALVVVIPTILVGALFWWLDSVAWGLPALLAEIVLL... |
| O27460 | 25-274 | 250 | HPVVWMGSAVEWMRNILGNSRISGIILTIAVAAPFTLPLFLINHLQDPLNLIISSILLSAVISIRMLVTSALEVGGSLKEDIEDA... |
| B6QXF6 | 17-294 | 278 | LDAVIGDPNWFWSRLPHPVTLFGKQISLLESWYNKTSFSAKRRKVNGVRTLLSLVATAGIIGTLLQTTLEGSFVGNILLALIGMT... |
| A0A149VY76 | 12-261 | 250 | LEPWRPQAWGAWGVNLLTRWRLFLFARMPRVGAVLWLGVVGFPLLLMTGVQSGLGWLHLGALVPLLVLGLGIDLRGPLAHLRQGG... |
| T0N636 | 16-283 | 268 | AVVLDFVFGDPRKYLSPVTLIRRVSTFFETFFRTYSHRMAAGAFFAIFISVLFAIPFTGLLILVSRVLIIQAIVGIILFKGLFSI... |
| A0A1F8LU76 | 23-345 | 323 | VFDALIGDPHKKWHPVNLIGLAINDFKRKLLSGYARKDKFFGILLIFLVTLLIGGAFFAFQVATWGFLGIWDSSLQEGFLKQLAY... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model