DPCfam | MC112378
Metacluster Properties and Pfam Annotations
| Number of UniRef50 seed sequences | 1345 |
|---|---|
| Mean domain length (aa) | 296 ± 66 aa |
| Residues in low-complexity regions (%) | 7.68 |
| Residues in coiled-coil regions (%) | 0.0 |
| Predicted disordered residues (%) | 6.38 |
| Average transmembrane regions | 5.85 |
| Dominant Pfam architecture(s) | PF06738 |
| Sequences matching dominant architecture (%) | 62.82 |
| Average overlap percent | 89.56 |
| Pfam Overlap Label | Equivalent |
Seed Sequences
| Protein ID | Range | Length | Seed Sequence |
|---|---|---|---|
| U2REF1 | 14-339 | 326 | HATLIAQAAQILYTNGETTHATTEVVGELNALFGTDYTLVPSWPQLSLLHPDGTIVRAVPTRIEGINMRRVSRIHKALHAPGGPD... |
| A0A1E4JV73 | 14-315 | 302 | FVIALARRLHEYGTAAPRLEEAIAKVSARLGLACDVLSTPTSIVLSFSEQGRELDPVAEVTQVIRLAPGQVNLRRLCAVDEIADR... |
| F4R771 | 115-517 | 403 | VQVASVLERQAYILKLSKALLRFGSPGHRLVTQLETAAAALDLRAGFYNMPTLIFVTFGDHGTHTSEIHFVKATGGLDLGRLPRC... |
| UPI0009E7F243 | 35-277 | 243 | LNDLGDLLLEVGTLLMSAGANTNRIRVTMKRIAQSYHNQAEFLITHRAIMLTIYDEKGKTFFNQVKQTYAQVPDFTMVSGISRLS... |
| UPI00046D7CF8 | 50-365 | 316 | AIAVLLSSSGDSTTKATEELRSIARAYGASEVDVFVLPTGAFVRIQDPDGTTSTDFAAASSTPLRLDQISELYHLMREAYETRLD... |
| A0A1L8TRG1 | 13-234 | 222 | LRYGKIMLKSNYATNDVKNNLMKMACFIKSAEYSFFVTETALVVINSIDNEVRMVTVKDNAYNFEKTTLVEKEVTSFYNNQISTD... |
| H3NCF5 | 11-251 | 241 | EALNICMDIGRLMLSNGAETYRVEDTMHRIATSFKLEYVNVFVVPTAIIMTTKNEVGADVTQLVRVTDRATNLEMVAELNQLSRD... |
| R5L3Z3 | 72-296 | 225 | HSAQIAAKIVENGGEISRAEECVLRICKSAGAKNIHVFIIPSLIFASAEFGEKRYTAFKRIYKTDLNLGALEQANSESRALCASE... |
| C2L0Y7 | 30-283 | 254 | VGRMLMKSGAETYRVEETMNYVAKSLGVQHFSAYVLNRGIFASGTNEQGIKESGVMNVPDTVYNLRKVEEVNTLSRSLSKENRIP... |
| A0A0D6EMR1 | 620-952 | 333 | ILERQQFIMKMARAFMMFGAPSHRLEAQMQATARVLEINCQVVYIPGVMMLSFGDAATHTSDIKFLKQANGLDLGKLLAAYMIYF... |
Representative AlphaFold Structure
No AlphaFold representative is available for this metacluster.
Downloads
Seed Sequences
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Download the FASTA file containing the seed sequences
Multiple Sequence Alignment (MSA)
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Download the FASTA file containing the multiple sequence alignments
HMM Model
Not available
Download the HMM file containing the hidden Markov model